Protein–RNA interactions for Protein: Q9GZU7

CTDSP1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1Q9GZU7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CTDSP1Q9GZU7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTDSP1Q9GZU7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTDSP1Q9GZU7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTDSP1Q9GZU7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.82□□□□□ -0.2
CTDSP1Q9GZU7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CTDSP1Q9GZU7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CTDSP1Q9GZU7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CTDSP1Q9GZU7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 AC092437.1-201ENST00000624794 1048 ntBASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.81□□□□□ -0.2
CTDSP1Q9GZU7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 AC092068.3-201ENST00000587894 2016 ntBASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 RARRES2P4-201ENST00000514074 484 ntBASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 AC131281.2-201ENST00000520478 145 ntBASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 CYP2T3P-201ENST00000601990 817 ntBASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CTDSP1Q9GZU7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTDSP1Q9GZU7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTDSP1Q9GZU7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms