Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 ARMC10P1-201ENST00000313754 855 ntBASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 GUSBP12-201ENST00000513727 720 ntBASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 KRT8P26-201ENST00000534154 1276 ntBASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 LINC01451-201ENST00000623792 534 ntBASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.02■□□□□ 0.8
CCSER1Q9C0I3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCSER1Q9C0I3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
CCSER1Q9C0I3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCSER1Q9C0I3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCSER1Q9C0I3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCSER1Q9C0I3 AC097374.2-201ENST00000618617 1306 ntBASIC20.02■□□□□ 0.79
CCSER1Q9C0I3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCSER1Q9C0I3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
CCSER1Q9C0I3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20■□□□□ 0.79
CCSER1Q9C0I3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20■□□□□ 0.79
CCSER1Q9C0I3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20■□□□□ 0.79
CCSER1Q9C0I3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20■□□□□ 0.79
CCSER1Q9C0I3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20■□□□□ 0.79
CCSER1Q9C0I3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 FXN-203ENST00000396366 922 ntTSL 2 BASIC20■□□□□ 0.79
CCSER1Q9C0I3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
CCSER1Q9C0I3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20■□□□□ 0.79
CCSER1Q9C0I3 AC090616.6-201ENST00000582640 721 ntBASIC20■□□□□ 0.79
CCSER1Q9C0I3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 AC116407.4-201ENST00000623319 1061 ntBASIC20■□□□□ 0.79
CCSER1Q9C0I3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 HLA-J-201ENST00000462773 1622 ntBASIC20■□□□□ 0.79
CCSER1Q9C0I3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CCSER1Q9C0I3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCSER1Q9C0I3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20■□□□□ 0.79
CCSER1Q9C0I3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 BX276092.7-203ENST00000637198 1536 ntBASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 AL845331.1-201ENST00000424978 1190 ntBASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 AL592071.1-201ENST00000611956 408 ntBASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCSER1Q9C0I3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms