Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2OQ9C0C9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 CRYGEP-201ENST00000412192 528 ntBASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 AC063926.2-201ENST00000623766 1308 ntBASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2OQ9C0C9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 KRT18P27-201ENST00000427733 1299 ntBASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 BX005266.1-201ENST00000473402 457 ntBASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.67■□□□□ 0.74
UBE2OQ9C0C9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 AC136632.2-201ENST00000512891 861 ntBASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 AC009154.2-201ENST00000621177 724 ntBASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 AF228730.6-201ENST00000641497 218 ntBASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 AC084121.3-201ENST00000641716 218 ntBASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 AC105233.6-201ENST00000642093 218 ntBASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 AL163051.1-201ENST00000569214 1512 ntBASIC19.66■□□□□ 0.74
UBE2OQ9C0C9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2OQ9C0C9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2OQ9C0C9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2OQ9C0C9 Z98044.1-201ENST00000632503 1764 ntBASIC19.65■□□□□ 0.74
UBE2OQ9C0C9 BX323043.1-201ENST00000641006 1765 ntBASIC19.65■□□□□ 0.74
UBE2OQ9C0C9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2OQ9C0C9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
UBE2OQ9C0C9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2OQ9C0C9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
UBE2OQ9C0C9 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE2OQ9C0C9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.65■□□□□ 0.74
UBE2OQ9C0C9 GK-202ENST00000378941 458 ntTSL 3 BASIC19.65■□□□□ 0.74
UBE2OQ9C0C9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
UBE2OQ9C0C9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.65■□□□□ 0.74
UBE2OQ9C0C9 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.65■□□□□ 0.74
UBE2OQ9C0C9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.65■□□□□ 0.74
UBE2OQ9C0C9 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms