Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 NCF1C-201ENST00000438382 1427 ntBASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RTFDC1Q9BY42 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 RPS15P9-201ENST00000494093 319 ntBASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTFDC1Q9BY42 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 AC018845.2-201ENST00000568326 409 ntBASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.61■■□□□ 1.05
RTFDC1Q9BY42 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.6■■□□□ 1.05
RTFDC1Q9BY42 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTFDC1Q9BY42 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTFDC1Q9BY42 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RTFDC1Q9BY42 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.6■■□□□ 1.05
RTFDC1Q9BY42 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.6■■□□□ 1.05
RTFDC1Q9BY42 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.6■■□□□ 1.05
RTFDC1Q9BY42 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
RTFDC1Q9BY42 MIR4751-201ENST00000578027 74 ntBASIC21.6■■□□□ 1.05
RTFDC1Q9BY42 MIR3197-201ENST00000582241 73 ntBASIC21.6■■□□□ 1.05
RTFDC1Q9BY42 SIRPAP1-201ENST00000448467 1770 ntBASIC21.6■■□□□ 1.05
RTFDC1Q9BY42 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.6■■□□□ 1.05
RTFDC1Q9BY42 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTFDC1Q9BY42 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.6■■□□□ 1.05
RTFDC1Q9BY42 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.6■■□□□ 1.05
RTFDC1Q9BY42 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.6■■□□□ 1.05
RTFDC1Q9BY42 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTFDC1Q9BY42 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 ELL2P1-201ENST00000413990 1906 ntBASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 IGLL3P-201ENST00000412472 434 ntBASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 CNN2P11-201ENST00000429351 262 ntBASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 AC004790.2-201ENST00000623588 572 ntBASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 PHGDH-209ENST00000641074 1780 ntBASIC21.59■■□□□ 1.05
RTFDC1Q9BY42 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTFDC1Q9BY42 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RTFDC1Q9BY42 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.58■■□□□ 1.05
RTFDC1Q9BY42 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms