Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 IGHV3-47-201ENST00000425060 335 ntBASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 TPM4P1-201ENST00000436100 807 ntBASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 MTCL1P1-201ENST00000446207 792 ntBASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 AC091304.2-201ENST00000564639 760 ntBASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SSBP3Q9BWW4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 AL845331.1-201ENST00000424978 1190 ntBASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 AP005901.3-202ENST00000581653 237 ntBASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 AL353801.3-201ENST00000609898 542 ntBASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 AC009113.1-201ENST00000570267 2443 ntBASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SSBP3Q9BWW4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 AL133373.2-201ENST00000623187 2828 ntBASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 NUS1P2-201ENST00000417358 873 ntBASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 TSPY19P-201ENST00000418461 509 ntBASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 TSPY18P-201ENST00000441642 509 ntBASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 AC091607.1-201ENST00000490318 1060 ntBASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms