Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 AC099791.2-201ENST00000605725 427 ntBASIC13.11□□□□□ -0.31
VAMP8Q9BV40 AC120498.10-201ENST00000621827 505 ntBASIC13.11□□□□□ -0.31
VAMP8Q9BV40 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 AC104581.4-201ENST00000623126 3052 ntBASIC13.11□□□□□ -0.31
VAMP8Q9BV40 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
VAMP8Q9BV40 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 CICP13-201ENST00000422015 2789 ntBASIC13.1□□□□□ -0.31
VAMP8Q9BV40 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 AP002414.2-201ENST00000591780 3365 ntBASIC13.1□□□□□ -0.31
VAMP8Q9BV40 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC13.1□□□□□ -0.31
VAMP8Q9BV40 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 HYI-213ENST00000583037 1322 ntTSL 5 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VAMP8Q9BV40 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
VAMP8Q9BV40 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
VAMP8Q9BV40 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VAMP8Q9BV40 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
VAMP8Q9BV40 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VAMP8Q9BV40 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VAMP8Q9BV40 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.09□□□□□ -0.31
VAMP8Q9BV40 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.09□□□□□ -0.31
VAMP8Q9BV40 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.09□□□□□ -0.31
VAMP8Q9BV40 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VAMP8Q9BV40 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
VAMP8Q9BV40 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC13.09□□□□□ -0.31
VAMP8Q9BV40 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VAMP8Q9BV40 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VAMP8Q9BV40 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms