Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE1Q99829 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CPNE1Q99829 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE1Q99829 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.91■□□□□ 0.46
CPNE1Q99829 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CPNE1Q99829 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.91■□□□□ 0.46
CPNE1Q99829 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.91■□□□□ 0.46
CPNE1Q99829 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE1Q99829 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CPNE1Q99829 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.91■□□□□ 0.46
CPNE1Q99829 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE1Q99829 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE1Q99829 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CPNE1Q99829 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.91■□□□□ 0.46
CPNE1Q99829 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE1Q99829 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.91■□□□□ 0.46
CPNE1Q99829 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.91■□□□□ 0.46
CPNE1Q99829 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE1Q99829 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CPNE1Q99829 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE1Q99829 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE1Q99829 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE1Q99829 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CPNE1Q99829 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE1Q99829 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CPNE1Q99829 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CPNE1Q99829 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.91■□□□□ 0.46
CPNE1Q99829 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE1Q99829 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE1Q99829 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
CPNE1Q99829 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CPNE1Q99829 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE1Q99829 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE1Q99829 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE1Q99829 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.9■□□□□ 0.46
CPNE1Q99829 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.9■□□□□ 0.46
CPNE1Q99829 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.9■□□□□ 0.46
CPNE1Q99829 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CPNE1Q99829 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.9■□□□□ 0.46
CPNE1Q99829 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CPNE1Q99829 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.89■□□□□ 0.46
CPNE1Q99829 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
CPNE1Q99829 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CPNE1Q99829 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.89■□□□□ 0.46
CPNE1Q99829 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.89■□□□□ 0.46
CPNE1Q99829 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
CPNE1Q99829 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.89■□□□□ 0.46
CPNE1Q99829 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.89■□□□□ 0.46
CPNE1Q99829 KRT89P-201ENST00000620027 1478 ntBASIC17.89■□□□□ 0.45
CPNE1Q99829 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE1Q99829 AC009949.1-201ENST00000623048 1830 ntBASIC17.89■□□□□ 0.45
CPNE1Q99829 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.89■□□□□ 0.45
CPNE1Q99829 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE1Q99829 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE1Q99829 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CPNE1Q99829 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.89■□□□□ 0.45
CPNE1Q99829 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.89■□□□□ 0.45
CPNE1Q99829 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.89■□□□□ 0.45
CPNE1Q99829 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.89■□□□□ 0.45
CPNE1Q99829 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
CPNE1Q99829 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.89■□□□□ 0.45
CPNE1Q99829 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.89■□□□□ 0.45
CPNE1Q99829 AC034232.1-201ENST00000506026 1064 ntBASIC17.89■□□□□ 0.45
CPNE1Q99829 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.89■□□□□ 0.45
CPNE1Q99829 LINC01451-201ENST00000623792 534 ntBASIC17.89■□□□□ 0.45
CPNE1Q99829 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CPNE1Q99829 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE1Q99829 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.89■□□□□ 0.45
CPNE1Q99829 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE1Q99829 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.89■□□□□ 0.45
CPNE1Q99829 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CPNE1Q99829 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms