Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SCAF11Q99590 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC25.53■■□□□ 1.68
SCAF11Q99590 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SCAF11Q99590 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC25.53■■□□□ 1.68
SCAF11Q99590 HLA-J-203ENST00000494367 1087 ntBASIC25.53■■□□□ 1.68
SCAF11Q99590 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC25.53■■□□□ 1.68
SCAF11Q99590 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC25.53■■□□□ 1.68
SCAF11Q99590 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC25.53■■□□□ 1.68
SCAF11Q99590 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC25.53■■□□□ 1.68
SCAF11Q99590 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
SCAF11Q99590 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SCAF11Q99590 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SCAF11Q99590 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SCAF11Q99590 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC25.52■■□□□ 1.68
SCAF11Q99590 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SCAF11Q99590 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SCAF11Q99590 AC010460.3-201ENST00000511359 1579 ntBASIC25.52■■□□□ 1.68
SCAF11Q99590 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC25.52■■□□□ 1.68
SCAF11Q99590 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC25.52■■□□□ 1.68
SCAF11Q99590 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SCAF11Q99590 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SCAF11Q99590 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC25.52■■□□□ 1.68
SCAF11Q99590 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SCAF11Q99590 STOM-202ENST00000347359 870 ntTSL 2 BASIC25.52■■□□□ 1.68
SCAF11Q99590 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SCAF11Q99590 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SCAF11Q99590 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC25.52■■□□□ 1.68
SCAF11Q99590 IGHV3-65-201ENST00000523210 341 ntBASIC25.52■■□□□ 1.68
SCAF11Q99590 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC25.52■■□□□ 1.68
SCAF11Q99590 AC008667.4-201ENST00000607370 168 ntBASIC25.52■■□□□ 1.68
SCAF11Q99590 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC25.52■■□□□ 1.68
SCAF11Q99590 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
SCAF11Q99590 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC25.51■■□□□ 1.67
SCAF11Q99590 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC25.51■■□□□ 1.67
SCAF11Q99590 AC132938.6-201ENST00000623828 1655 ntBASIC25.51■■□□□ 1.67
SCAF11Q99590 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC25.51■■□□□ 1.67
SCAF11Q99590 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SCAF11Q99590 ESPNP-201ENST00000270691 2015 ntBASIC25.51■■□□□ 1.67
SCAF11Q99590 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC25.51■■□□□ 1.67
SCAF11Q99590 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC25.51■■□□□ 1.67
SCAF11Q99590 AC096633.1-201ENST00000422446 749 ntBASIC25.51■■□□□ 1.67
SCAF11Q99590 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC25.51■■□□□ 1.67
SCAF11Q99590 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC25.51■■□□□ 1.67
SCAF11Q99590 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
SCAF11Q99590 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC25.51■■□□□ 1.67
SCAF11Q99590 METTL23-205ENST00000588302 925 ntTSL 5 BASIC25.51■■□□□ 1.67
SCAF11Q99590 AC010507.1-201ENST00000633895 436 ntBASIC25.51■■□□□ 1.67
SCAF11Q99590 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC25.51■■□□□ 1.67
SCAF11Q99590 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SCAF11Q99590 ADM-208ENST00000534464 1640 ntTSL 2 BASIC25.51■■□□□ 1.67
SCAF11Q99590 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SCAF11Q99590 GMCL1P1-201ENST00000463439 1581 ntBASIC25.51■■□□□ 1.67
SCAF11Q99590 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC25.5■■□□□ 1.67
SCAF11Q99590 PKD1P6-201ENST00000343738 4769 ntBASIC25.5■■□□□ 1.67
SCAF11Q99590 AP000974.1-201ENST00000623909 2387 ntBASIC25.5■■□□□ 1.67
SCAF11Q99590 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
SCAF11Q99590 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF11Q99590 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF11Q99590 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC25.5■■□□□ 1.67
SCAF11Q99590 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF11Q99590 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF11Q99590 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF11Q99590 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC25.5■■□□□ 1.67
SCAF11Q99590 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC25.5■■□□□ 1.67
SCAF11Q99590 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC25.5■■□□□ 1.67
SCAF11Q99590 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC25.5■■□□□ 1.67
SCAF11Q99590 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF11Q99590 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
SCAF11Q99590 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SCAF11Q99590 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC25.5■■□□□ 1.67
SCAF11Q99590 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SCAF11Q99590 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC25.49■■□□□ 1.67
SCAF11Q99590 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SCAF11Q99590 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SCAF11Q99590 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SCAF11Q99590 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SCAF11Q99590 PTMS-202ENST00000389462 773 ntTSL 2 BASIC25.49■■□□□ 1.67
SCAF11Q99590 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC25.49■■□□□ 1.67
SCAF11Q99590 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC25.49■■□□□ 1.67
SCAF11Q99590 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
SCAF11Q99590 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
SCAF11Q99590 GREM1-201ENST00000560677 623 ntTSL 4 BASIC25.49■■□□□ 1.67
SCAF11Q99590 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SCAF11Q99590 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
SCAF11Q99590 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SCAF11Q99590 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
SCAF11Q99590 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SCAF11Q99590 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SCAF11Q99590 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC25.48■■□□□ 1.67
SCAF11Q99590 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC25.48■■□□□ 1.67
SCAF11Q99590 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
SCAF11Q99590 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC25.48■■□□□ 1.67
SCAF11Q99590 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
SCAF11Q99590 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SCAF11Q99590 AC093512.1-201ENST00000617969 520 ntBASIC25.48■■□□□ 1.67
SCAF11Q99590 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC25.48■■□□□ 1.67
SCAF11Q99590 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC25.48■■□□□ 1.67
SCAF11Q99590 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SCAF11Q99590 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC25.48■■□□□ 1.67
SCAF11Q99590 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms