Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
NOTCH4Q99466 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NOTCH4Q99466 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NOTCH4Q99466 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NOTCH4Q99466 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NOTCH4Q99466 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NOTCH4Q99466 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.33■□□□□ 0.52
NOTCH4Q99466 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NOTCH4Q99466 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.33■□□□□ 0.52
NOTCH4Q99466 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NOTCH4Q99466 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NOTCH4Q99466 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.33■□□□□ 0.52
NOTCH4Q99466 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH4Q99466 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH4Q99466 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH4Q99466 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH4Q99466 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
NOTCH4Q99466 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.32■□□□□ 0.52
NOTCH4Q99466 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.32■□□□□ 0.52
NOTCH4Q99466 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH4Q99466 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH4Q99466 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NOTCH4Q99466 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.32■□□□□ 0.52
NOTCH4Q99466 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.32■□□□□ 0.52
NOTCH4Q99466 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.32■□□□□ 0.52
NOTCH4Q99466 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.32■□□□□ 0.52
NOTCH4Q99466 MIR3687-2-201ENST00000577708 61 ntBASIC18.32■□□□□ 0.52
NOTCH4Q99466 MIR3687-1-201ENST00000614492 61 ntBASIC18.32■□□□□ 0.52
NOTCH4Q99466 AC010654.1-201ENST00000615722 808 ntBASIC18.32■□□□□ 0.52
NOTCH4Q99466 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.32■□□□□ 0.52
NOTCH4Q99466 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH4Q99466 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.32■□□□□ 0.52
NOTCH4Q99466 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.32■□□□□ 0.52
NOTCH4Q99466 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NOTCH4Q99466 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH4Q99466 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH4Q99466 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.32■□□□□ 0.52
NOTCH4Q99466 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH4Q99466 WIZP1-201ENST00000531444 2299 ntBASIC18.32■□□□□ 0.52
NOTCH4Q99466 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH4Q99466 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH4Q99466 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
NOTCH4Q99466 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NOTCH4Q99466 COX5BP2-201ENST00000392354 334 ntBASIC18.32■□□□□ 0.52
NOTCH4Q99466 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.32■□□□□ 0.52
NOTCH4Q99466 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.32■□□□□ 0.52
NOTCH4Q99466 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.32■□□□□ 0.52
NOTCH4Q99466 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH4Q99466 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH4Q99466 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NOTCH4Q99466 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
NOTCH4Q99466 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH4Q99466 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH4Q99466 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.31■□□□□ 0.52
NOTCH4Q99466 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH4Q99466 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH4Q99466 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.31■□□□□ 0.52
NOTCH4Q99466 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.31■□□□□ 0.52
NOTCH4Q99466 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH4Q99466 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH4Q99466 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH4Q99466 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.31■□□□□ 0.52
NOTCH4Q99466 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.31■□□□□ 0.52
NOTCH4Q99466 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
NOTCH4Q99466 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.31■□□□□ 0.52
NOTCH4Q99466 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH4Q99466 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.31■□□□□ 0.52
NOTCH4Q99466 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH4Q99466 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH4Q99466 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
NOTCH4Q99466 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH4Q99466 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH4Q99466 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NOTCH4Q99466 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
NOTCH4Q99466 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NOTCH4Q99466 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NOTCH4Q99466 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.3■□□□□ 0.52
NOTCH4Q99466 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NOTCH4Q99466 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NOTCH4Q99466 METTL21AP1-201ENST00000438852 635 ntBASIC18.3■□□□□ 0.52
NOTCH4Q99466 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.3■□□□□ 0.52
NOTCH4Q99466 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NOTCH4Q99466 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.3■□□□□ 0.52
NOTCH4Q99466 AL513190.1-201ENST00000621254 727 ntBASIC18.3■□□□□ 0.52
NOTCH4Q99466 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.3■□□□□ 0.52
NOTCH4Q99466 AL805961.1-202ENST00000641562 540 ntBASIC18.3■□□□□ 0.52
NOTCH4Q99466 AC135776.1-201ENST00000319817 2481 ntBASIC18.3■□□□□ 0.52
NOTCH4Q99466 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.3■□□□□ 0.52
NOTCH4Q99466 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.3■□□□□ 0.52
NOTCH4Q99466 AC018445.3-201ENST00000624177 1945 ntBASIC18.3■□□□□ 0.52
NOTCH4Q99466 BX276092.7-203ENST00000637198 1536 ntBASIC18.3■□□□□ 0.52
NOTCH4Q99466 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NOTCH4Q99466 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
NOTCH4Q99466 YBX1P5-201ENST00000509441 847 ntBASIC18.3■□□□□ 0.52
NOTCH4Q99466 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.3■□□□□ 0.52
NOTCH4Q99466 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NOTCH4Q99466 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
NOTCH4Q99466 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NOTCH4Q99466 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NOTCH4Q99466 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms