Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.09□□□□□ -0.31
MUC4Q99102 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
MUC4Q99102 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.09□□□□□ -0.31
MUC4Q99102 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
MUC4Q99102 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MUC4Q99102 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.09□□□□□ -0.31
MUC4Q99102 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MUC4Q99102 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MUC4Q99102 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
MUC4Q99102 LINC00602-201ENST00000629776 2065 ntBASIC13.09□□□□□ -0.31
MUC4Q99102 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
MUC4Q99102 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
MUC4Q99102 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
MUC4Q99102 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
MUC4Q99102 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
MUC4Q99102 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
MUC4Q99102 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
MUC4Q99102 AC104076.2-201ENST00000448912 469 ntBASIC13.08□□□□□ -0.31
MUC4Q99102 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.08□□□□□ -0.31
MUC4Q99102 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.08□□□□□ -0.31
MUC4Q99102 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.08□□□□□ -0.31
MUC4Q99102 FAM87A-204ENST00000613235 858 ntBASIC13.08□□□□□ -0.31
MUC4Q99102 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.08□□□□□ -0.32
MUC4Q99102 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MUC4Q99102 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MUC4Q99102 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MUC4Q99102 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
MUC4Q99102 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.08□□□□□ -0.32
MUC4Q99102 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MUC4Q99102 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MUC4Q99102 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MUC4Q99102 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
MUC4Q99102 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.08□□□□□ -0.32
MUC4Q99102 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.08□□□□□ -0.32
MUC4Q99102 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MUC4Q99102 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.08□□□□□ -0.32
MUC4Q99102 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MUC4Q99102 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
MUC4Q99102 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC13.08□□□□□ -0.32
MUC4Q99102 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MUC4Q99102 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MUC4Q99102 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MUC4Q99102 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MUC4Q99102 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.08□□□□□ -0.32
MUC4Q99102 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.08□□□□□ -0.32
MUC4Q99102 AC009065.1-201ENST00000564055 1225 ntBASIC13.08□□□□□ -0.32
MUC4Q99102 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.08□□□□□ -0.32
MUC4Q99102 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.08□□□□□ -0.32
MUC4Q99102 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MUC4Q99102 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MUC4Q99102 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MUC4Q99102 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
MUC4Q99102 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MUC4Q99102 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.07□□□□□ -0.32
MUC4Q99102 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.07□□□□□ -0.32
MUC4Q99102 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.07□□□□□ -0.32
MUC4Q99102 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.07□□□□□ -0.32
MUC4Q99102 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.07□□□□□ -0.32
MUC4Q99102 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.07□□□□□ -0.32
MUC4Q99102 AC010240.3-201ENST00000607688 395 ntBASIC13.07□□□□□ -0.32
MUC4Q99102 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
MUC4Q99102 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
MUC4Q99102 AC022211.2-201ENST00000585075 2527 ntBASIC13.07□□□□□ -0.32
MUC4Q99102 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.07□□□□□ -0.32
MUC4Q99102 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
MUC4Q99102 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
MUC4Q99102 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.07□□□□□ -0.32
MUC4Q99102 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.07□□□□□ -0.32
MUC4Q99102 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.07□□□□□ -0.32
MUC4Q99102 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
MUC4Q99102 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.07□□□□□ -0.32
MUC4Q99102 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
MUC4Q99102 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MUC4Q99102 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
MUC4Q99102 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms