Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CDK5RAP2Q96SN8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CDK5RAP2Q96SN8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.95■□□□□ 0.95
CDK5RAP2Q96SN8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 HLA-J-201ENST00000462773 1622 ntBASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 AC108073.2-201ENST00000464002 357 ntBASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 AC009336.1-201ENST00000608941 1553 ntBASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 AL049757.1-201ENST00000616842 1596 ntBASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5RAP2Q96SN8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 STK19B-204ENST00000512515 211 ntBASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 LINC00304-203ENST00000565008 1864 ntBASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 BICD1-207ENST00000551848 1962 ntBASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 TERC-201ENST00000602385 541 ntBASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK5RAP2Q96SN8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CDK5RAP2Q96SN8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 AC108751.1-201ENST00000490852 363 ntBASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 MIR1199-201ENST00000621445 119 ntBASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.92■□□□□ 0.94
CDK5RAP2Q96SN8 AC093909.1-201ENST00000504731 1122 ntBASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms