Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 AC092910.1-201ENST00000482027 1129 ntBASIC17.91■□□□□ 0.46
SIPA1Q96FS4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 MTDHP4-201ENST00000600287 670 ntBASIC17.91■□□□□ 0.46
SIPA1Q96FS4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIPA1Q96FS4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 PHGDH-209ENST00000641074 1780 ntBASIC17.9■□□□□ 0.46
SIPA1Q96FS4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 AC096633.1-201ENST00000422446 749 ntBASIC17.9■□□□□ 0.46
SIPA1Q96FS4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 AC022898.2-201ENST00000616822 1312 ntBASIC17.9■□□□□ 0.46
SIPA1Q96FS4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 AC093010.1-201ENST00000473625 1624 ntBASIC17.9■□□□□ 0.46
SIPA1Q96FS4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIPA1Q96FS4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SIPA1Q96FS4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SIPA1Q96FS4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SIPA1Q96FS4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 IGHV3-22-201ENST00000520721 359 ntBASIC17.89■□□□□ 0.45
SIPA1Q96FS4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 AC092865.5-201ENST00000545435 363 ntBASIC17.89■□□□□ 0.45
SIPA1Q96FS4 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 AC012640.2-201ENST00000561606 901 ntBASIC17.89■□□□□ 0.45
SIPA1Q96FS4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 AC139530.3-201ENST00000620344 690 ntBASIC17.89■□□□□ 0.45
SIPA1Q96FS4 AC008735.5-201ENST00000623544 497 ntBASIC17.89■□□□□ 0.45
SIPA1Q96FS4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SIPA1Q96FS4 AC104109.2-201ENST00000602919 1418 ntBASIC17.89■□□□□ 0.45
SIPA1Q96FS4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIPA1Q96FS4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms