Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM11Q96F44 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.62
TRIM11Q96F44 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM11Q96F44 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TRIM11Q96F44 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM11Q96F44 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM11Q96F44 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM11Q96F44 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM11Q96F44 AC073508.3-201ENST00000619697 1419 ntBASIC18.95■□□□□ 0.62
TRIM11Q96F44 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM11Q96F44 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM11Q96F44 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.95■□□□□ 0.62
TRIM11Q96F44 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRIM11Q96F44 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM11Q96F44 HOMER2P1-201ENST00000455653 964 ntBASIC18.95■□□□□ 0.62
TRIM11Q96F44 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.95■□□□□ 0.62
TRIM11Q96F44 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM11Q96F44 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM11Q96F44 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM11Q96F44 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRIM11Q96F44 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRIM11Q96F44 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRIM11Q96F44 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM11Q96F44 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM11Q96F44 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
TRIM11Q96F44 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TRIM11Q96F44 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
TRIM11Q96F44 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM11Q96F44 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM11Q96F44 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM11Q96F44 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM11Q96F44 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM11Q96F44 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM11Q96F44 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM11Q96F44 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM11Q96F44 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM11Q96F44 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM11Q96F44 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM11Q96F44 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM11Q96F44 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM11Q96F44 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM11Q96F44 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM11Q96F44 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM11Q96F44 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM11Q96F44 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TRIM11Q96F44 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
TRIM11Q96F44 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.94■□□□□ 0.62
TRIM11Q96F44 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM11Q96F44 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.94■□□□□ 0.62
TRIM11Q96F44 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM11Q96F44 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM11Q96F44 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TRIM11Q96F44 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TRIM11Q96F44 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRIM11Q96F44 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM11Q96F44 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM11Q96F44 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM11Q96F44 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM11Q96F44 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM11Q96F44 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM11Q96F44 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.94■□□□□ 0.62
TRIM11Q96F44 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
TRIM11Q96F44 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM11Q96F44 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM11Q96F44 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM11Q96F44 AL355312.1-201ENST00000407115 2176 ntBASIC18.93■□□□□ 0.62
TRIM11Q96F44 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRIM11Q96F44 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM11Q96F44 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 TSPY12P-201ENST00000421279 868 ntBASIC18.93■□□□□ 0.62
TRIM11Q96F44 AC117947.1-201ENST00000427448 529 ntBASIC18.93■□□□□ 0.62
TRIM11Q96F44 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.93■□□□□ 0.62
TRIM11Q96F44 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
TRIM11Q96F44 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM11Q96F44 AC004263.2-201ENST00000617183 678 ntBASIC18.93■□□□□ 0.62
TRIM11Q96F44 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TRIM11Q96F44 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TRIM11Q96F44 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM11Q96F44 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TRIM11Q96F44 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms