Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF31Q96EP0 AL390961.4-201ENST00000623958 2535 ntBASIC17.28■□□□□ 0.36
RNF31Q96EP0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF31Q96EP0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF31Q96EP0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF31Q96EP0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF31Q96EP0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF31Q96EP0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF31Q96EP0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF31Q96EP0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF31Q96EP0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF31Q96EP0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
RNF31Q96EP0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RNF31Q96EP0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF31Q96EP0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF31Q96EP0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF31Q96EP0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF31Q96EP0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
RNF31Q96EP0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF31Q96EP0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF31Q96EP0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF31Q96EP0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF31Q96EP0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF31Q96EP0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF31Q96EP0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF31Q96EP0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF31Q96EP0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF31Q96EP0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RNF31Q96EP0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF31Q96EP0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF31Q96EP0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF31Q96EP0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF31Q96EP0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF31Q96EP0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF31Q96EP0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF31Q96EP0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF31Q96EP0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF31Q96EP0 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF31Q96EP0 AF238378.1-201ENST00000526806 358 ntBASIC17.27■□□□□ 0.36
RNF31Q96EP0 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF31Q96EP0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF31Q96EP0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
RNF31Q96EP0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF31Q96EP0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF31Q96EP0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
RNF31Q96EP0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
RNF31Q96EP0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
RNF31Q96EP0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF31Q96EP0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF31Q96EP0 ANO7L1-203ENST00000602586 1720 ntBASIC17.27■□□□□ 0.35
RNF31Q96EP0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF31Q96EP0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF31Q96EP0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF31Q96EP0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RNF31Q96EP0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
RNF31Q96EP0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF31Q96EP0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.26■□□□□ 0.35
RNF31Q96EP0 AP002469.2-201ENST00000531724 424 ntBASIC17.26■□□□□ 0.35
RNF31Q96EP0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF31Q96EP0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF31Q96EP0 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF31Q96EP0 BNIP3P18-201ENST00000593976 575 ntBASIC17.26■□□□□ 0.35
RNF31Q96EP0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF31Q96EP0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RNF31Q96EP0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RNF31Q96EP0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
RNF31Q96EP0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF31Q96EP0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF31Q96EP0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF31Q96EP0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF31Q96EP0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF31Q96EP0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF31Q96EP0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RNF31Q96EP0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms