Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 KRT18P55-202ENST00000578578 1546 ntBASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 AC036111.1-201ENST00000533973 1582 ntBASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 AC034236.2-201ENST00000606662 1610 ntBASIC15.1■□□□□ 0.01
RTN4IP1Q8WWV3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 AC124067.4-201ENST00000519691 2379 ntBASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 KRT8P50-201ENST00000562022 1438 ntBASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTN4IP1Q8WWV3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RTN4IP1Q8WWV3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.08■□□□□ 0.01
RTN4IP1Q8WWV3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
RTN4IP1Q8WWV3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
RTN4IP1Q8WWV3 AC099343.3-201ENST00000605834 2503 ntBASIC15.08■□□□□ 0.01
RTN4IP1Q8WWV3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 INGX-201ENST00000359239 846 ntBASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RTN4IP1Q8WWV3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms