Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 MIR4758-201ENST00000577688 71 ntBASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 GPAT2P1-201ENST00000444924 1672 ntBASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SMIM4Q8WVI0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SMIM4Q8WVI0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 AL024508.2-201ENST00000607749 1894 ntBASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 AC036111.1-201ENST00000533973 1582 ntBASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM4Q8WVI0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms