Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 VENTXP7-201ENST00000475503 772 ntBASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 AC112698.1-201ENST00000510299 916 ntBASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 KRT18P1-202ENST00000452408 1331 ntBASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC12Q8WUD4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 ATP5G2P1-201ENST00000433580 426 ntBASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 AC011840.4-201ENST00000578471 627 ntBASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
CCDC12Q8WUD4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 AC246785.2-201ENST00000432512 513 ntBASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 DRAXINP1-201ENST00000437611 948 ntBASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 AC093458.2-201ENST00000623150 629 ntBASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC12Q8WUD4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC12Q8WUD4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC12Q8WUD4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CCDC12Q8WUD4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CCDC12Q8WUD4 KRT18P55-202ENST00000578578 1546 ntBASIC20.64■□□□□ 0.9
CCDC12Q8WUD4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC12Q8WUD4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC12Q8WUD4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC12Q8WUD4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC12Q8WUD4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC12Q8WUD4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC12Q8WUD4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC12Q8WUD4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC12Q8WUD4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC12Q8WUD4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms