Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SH3RF3Q8TEJ3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 AC079776.2-201ENST00000641154 1609 ntBASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 OR7E14P-202ENST00000530490 1290 ntBASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.18■□□□□ 0.98
SH3RF3Q8TEJ3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 AC009949.1-201ENST00000623048 1830 ntBASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.17■□□□□ 0.98
SH3RF3Q8TEJ3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 RPS2P28-201ENST00000314255 741 ntBASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 RPL13AP23-201ENST00000480739 586 ntBASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SH3RF3Q8TEJ3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 AL020996.1-203ENST00000536896 2307 ntBASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SH3RF3Q8TEJ3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms