Protein–RNA interactions for Protein: Q8TBY8

PMFBP1, Polyamine-modulated factor 1-binding protein 1, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1Q8TBY8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
PMFBP1Q8TBY8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 AC006557.2-201ENST00000592985 1240 ntBASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC24.53■■□□□ 1.52
PMFBP1Q8TBY8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 ANO7L1-203ENST00000602586 1720 ntBASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PMFBP1Q8TBY8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 GMCL1P1-201ENST00000463439 1581 ntBASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 AC096633.1-201ENST00000422446 749 ntBASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 AC136632.2-201ENST00000512891 861 ntBASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 ESPNP-201ENST00000270691 2015 ntBASIC24.51■■□□□ 1.51
PMFBP1Q8TBY8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC24.5■■□□□ 1.51
PMFBP1Q8TBY8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PMFBP1Q8TBY8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PMFBP1Q8TBY8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms