Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 AC015656.1-201ENST00000624209 3578 ntBASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC9.84□□□□□ -0.83
SPTSSBQ8NFR3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.84
SPTSSBQ8NFR3 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 AC134043.2-201ENST00000624206 2238 ntBASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 USO1-201ENST00000264904 4135 ntTSL 2 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 AC006333.2-201ENST00000607957 2099 ntBASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 POU5F1P4-201ENST00000413175 1085 ntBASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 PGM5P4-201ENST00000421970 445 ntBASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 AC120498.10-201ENST00000621827 505 ntBASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms