Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.69■□□□□ 0.74
NME8Q8N427 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NME8Q8N427 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NME8Q8N427 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
NME8Q8N427 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NME8Q8N427 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NME8Q8N427 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NME8Q8N427 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.68■□□□□ 0.74
NME8Q8N427 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NME8Q8N427 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NME8Q8N427 AL356309.3-201ENST00000624132 1934 ntBASIC19.68■□□□□ 0.74
NME8Q8N427 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NME8Q8N427 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
NME8Q8N427 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.68■□□□□ 0.74
NME8Q8N427 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NME8Q8N427 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NME8Q8N427 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NME8Q8N427 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.68■□□□□ 0.74
NME8Q8N427 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.68■□□□□ 0.74
NME8Q8N427 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NME8Q8N427 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.68■□□□□ 0.74
NME8Q8N427 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NME8Q8N427 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
NME8Q8N427 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NME8Q8N427 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NME8Q8N427 AC007967.3-201ENST00000434308 558 ntBASIC19.68■□□□□ 0.74
NME8Q8N427 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NME8Q8N427 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.68■□□□□ 0.74
NME8Q8N427 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.68■□□□□ 0.74
NME8Q8N427 AC139887.3-201ENST00000568585 713 ntBASIC19.68■□□□□ 0.74
NME8Q8N427 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.68■□□□□ 0.74
NME8Q8N427 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.68■□□□□ 0.74
NME8Q8N427 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NME8Q8N427 FAM215A-202ENST00000632077 792 ntBASIC19.68■□□□□ 0.74
NME8Q8N427 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.68■□□□□ 0.74
NME8Q8N427 AP000867.4-201ENST00000641616 219 ntBASIC19.68■□□□□ 0.74
NME8Q8N427 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NME8Q8N427 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.68■□□□□ 0.74
NME8Q8N427 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NME8Q8N427 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NME8Q8N427 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NME8Q8N427 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.68■□□□□ 0.74
NME8Q8N427 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NME8Q8N427 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NME8Q8N427 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NME8Q8N427 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NME8Q8N427 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NME8Q8N427 PHGDH-209ENST00000641074 1780 ntBASIC19.67■□□□□ 0.74
NME8Q8N427 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NME8Q8N427 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.67■□□□□ 0.74
NME8Q8N427 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
NME8Q8N427 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NME8Q8N427 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NME8Q8N427 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
NME8Q8N427 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NME8Q8N427 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NME8Q8N427 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NME8Q8N427 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.67■□□□□ 0.74
NME8Q8N427 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.67■□□□□ 0.74
NME8Q8N427 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.67■□□□□ 0.74
NME8Q8N427 AC021087.4-201ENST00000563761 564 ntBASIC19.67■□□□□ 0.74
NME8Q8N427 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.67■□□□□ 0.74
NME8Q8N427 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NME8Q8N427 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
NME8Q8N427 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NME8Q8N427 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NME8Q8N427 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NME8Q8N427 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
NME8Q8N427 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NME8Q8N427 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NME8Q8N427 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
NME8Q8N427 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
NME8Q8N427 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NME8Q8N427 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.67■□□□□ 0.74
NME8Q8N427 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.67■□□□□ 0.74
NME8Q8N427 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.67■□□□□ 0.74
NME8Q8N427 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NME8Q8N427 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NME8Q8N427 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NME8Q8N427 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NME8Q8N427 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NME8Q8N427 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
NME8Q8N427 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NME8Q8N427 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NME8Q8N427 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NME8Q8N427 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.66■□□□□ 0.74
NME8Q8N427 PMS2P1-201ENST00000431037 1228 ntBASIC19.66■□□□□ 0.74
NME8Q8N427 HNRNPDP1-201ENST00000439535 754 ntBASIC19.66■□□□□ 0.74
NME8Q8N427 AC122714.2-201ENST00000502787 707 ntBASIC19.66■□□□□ 0.74
NME8Q8N427 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.66■□□□□ 0.74
NME8Q8N427 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.66■□□□□ 0.74
NME8Q8N427 SART3-203ENST00000546611 1184 ntBASIC19.66■□□□□ 0.74
NME8Q8N427 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.66■□□□□ 0.74
NME8Q8N427 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.66■□□□□ 0.74
NME8Q8N427 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
NME8Q8N427 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.66■□□□□ 0.74
NME8Q8N427 AL139288.1-201ENST00000623748 933 ntBASIC19.66■□□□□ 0.74
NME8Q8N427 AC117500.6-201ENST00000624871 588 ntBASIC19.66■□□□□ 0.74
NME8Q8N427 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
NME8Q8N427 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms