Protein–RNA interactions for Protein: Q8IYS0

GRAMD1C, GRAM domain-containing protein 1C, humanhuman

Predictions only

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1CQ8IYS0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
GRAMD1CQ8IYS0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.09■□□□□ 0.81
GRAMD1CQ8IYS0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GRAMD1CQ8IYS0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
GRAMD1CQ8IYS0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GRAMD1CQ8IYS0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.08■□□□□ 0.81
GRAMD1CQ8IYS0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
GRAMD1CQ8IYS0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
GRAMD1CQ8IYS0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
GRAMD1CQ8IYS0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GRAMD1CQ8IYS0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GRAMD1CQ8IYS0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.08■□□□□ 0.81
GRAMD1CQ8IYS0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
GRAMD1CQ8IYS0 BX664615.1-201ENST00000443558 458 ntBASIC20.08■□□□□ 0.81
GRAMD1CQ8IYS0 AC113404.2-201ENST00000507884 177 ntBASIC20.08■□□□□ 0.81
GRAMD1CQ8IYS0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.08■□□□□ 0.81
GRAMD1CQ8IYS0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GRAMD1CQ8IYS0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.08■□□□□ 0.81
GRAMD1CQ8IYS0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
GRAMD1CQ8IYS0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
GRAMD1CQ8IYS0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
GRAMD1CQ8IYS0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GRAMD1CQ8IYS0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
GRAMD1CQ8IYS0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
GRAMD1CQ8IYS0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
GRAMD1CQ8IYS0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 STARP1-201ENST00000397973 869 ntBASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 AL359075.1-203ENST00000462729 1002 ntBASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GRAMD1CQ8IYS0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 AC008687.5-201ENST00000593746 558 ntBASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 REXO1L11P-201ENST00000620964 1927 ntBASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GRAMD1CQ8IYS0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.05■□□□□ 0.8
GRAMD1CQ8IYS0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.05■□□□□ 0.8
GRAMD1CQ8IYS0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.05■□□□□ 0.8
GRAMD1CQ8IYS0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.05■□□□□ 0.8
GRAMD1CQ8IYS0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GRAMD1CQ8IYS0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
GRAMD1CQ8IYS0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GRAMD1CQ8IYS0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.05■□□□□ 0.8
GRAMD1CQ8IYS0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRAMD1CQ8IYS0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GRAMD1CQ8IYS0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.05■□□□□ 0.8
GRAMD1CQ8IYS0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GRAMD1CQ8IYS0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
GRAMD1CQ8IYS0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms