Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCDC71Q8IV32 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 AD000864.1-201ENST00000624076 2295 ntBASIC16.81■□□□□ 0.28
CCDC71Q8IV32 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC71Q8IV32 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 CLEC4GP1-201ENST00000596555 870 ntBASIC16.8■□□□□ 0.28
CCDC71Q8IV32 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC71Q8IV32 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 PHGDH-209ENST00000641074 1780 ntBASIC16.79■□□□□ 0.28
CCDC71Q8IV32 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC71Q8IV32 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC71Q8IV32 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms