Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAPH1Q70E73 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
RAPH1Q70E73 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAPH1Q70E73 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAPH1Q70E73 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAPH1Q70E73 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAPH1Q70E73 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RAPH1Q70E73 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAPH1Q70E73 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAPH1Q70E73 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.03■□□□□ 0.48
RAPH1Q70E73 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAPH1Q70E73 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.03■□□□□ 0.48
RAPH1Q70E73 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAPH1Q70E73 KRT17P2-201ENST00000300992 1314 ntBASIC18.02■□□□□ 0.48
RAPH1Q70E73 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RAPH1Q70E73 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAPH1Q70E73 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RAPH1Q70E73 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.02■□□□□ 0.48
RAPH1Q70E73 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAPH1Q70E73 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAPH1Q70E73 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAPH1Q70E73 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.02■□□□□ 0.48
RAPH1Q70E73 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAPH1Q70E73 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.02■□□□□ 0.48
RAPH1Q70E73 SNORA78-201ENST00000459373 127 ntBASIC18.02■□□□□ 0.48
RAPH1Q70E73 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.02■□□□□ 0.48
RAPH1Q70E73 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.02■□□□□ 0.48
RAPH1Q70E73 AC006116.8-202ENST00000587620 1550 ntBASIC18.02■□□□□ 0.48
RAPH1Q70E73 AC010240.3-201ENST00000607688 395 ntBASIC18.02■□□□□ 0.48
RAPH1Q70E73 AC010653.2-201ENST00000623505 997 ntBASIC18.02■□□□□ 0.48
RAPH1Q70E73 AP006294.2-201ENST00000641667 209 ntBASIC18.02■□□□□ 0.48
RAPH1Q70E73 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAPH1Q70E73 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAPH1Q70E73 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAPH1Q70E73 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RAPH1Q70E73 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.02■□□□□ 0.47
RAPH1Q70E73 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
RAPH1Q70E73 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAPH1Q70E73 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
RAPH1Q70E73 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RAPH1Q70E73 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.02■□□□□ 0.47
RAPH1Q70E73 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAPH1Q70E73 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAPH1Q70E73 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAPH1Q70E73 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAPH1Q70E73 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAPH1Q70E73 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAPH1Q70E73 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAPH1Q70E73 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAPH1Q70E73 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAPH1Q70E73 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAPH1Q70E73 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAPH1Q70E73 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAPH1Q70E73 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAPH1Q70E73 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAPH1Q70E73 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAPH1Q70E73 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAPH1Q70E73 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.01■□□□□ 0.47
RAPH1Q70E73 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAPH1Q70E73 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAPH1Q70E73 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RAPH1Q70E73 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18■□□□□ 0.47
RAPH1Q70E73 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAPH1Q70E73 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAPH1Q70E73 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAPH1Q70E73 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAPH1Q70E73 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18■□□□□ 0.47
RAPH1Q70E73 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18■□□□□ 0.47
RAPH1Q70E73 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RAPH1Q70E73 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18■□□□□ 0.47
RAPH1Q70E73 TSPY14P-201ENST00000303979 915 ntBASIC18■□□□□ 0.47
RAPH1Q70E73 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAPH1Q70E73 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAPH1Q70E73 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RAPH1Q70E73 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAPH1Q70E73 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAPH1Q70E73 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAPH1Q70E73 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAPH1Q70E73 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAPH1Q70E73 AC128688.1-201ENST00000487626 519 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms