Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 AC120498.8-201ENST00000614275 531 ntBASIC16.9■□□□□ 0.3
LPCAT4Q643R3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.9■□□□□ 0.3
LPCAT4Q643R3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LPCAT4Q643R3 MST1L-201ENST00000442552 2185 ntBASIC16.89■□□□□ 0.3
LPCAT4Q643R3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LPCAT4Q643R3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 PRSS44-201ENST00000515154 1146 ntBASIC16.89■□□□□ 0.29
LPCAT4Q643R3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 AC005915.1-201ENST00000624912 2018 ntBASIC16.89■□□□□ 0.29
LPCAT4Q643R3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LPCAT4Q643R3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 AL109659.2-201ENST00000606809 1674 ntBASIC16.88■□□□□ 0.29
LPCAT4Q643R3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LPCAT4Q643R3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LPCAT4Q643R3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LPCAT4Q643R3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.87■□□□□ 0.29
LPCAT4Q643R3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.87■□□□□ 0.29
LPCAT4Q643R3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms