Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.67■□□□□ 0.58
TTC39BQ5VTQ0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 AC138028.4-201ENST00000564984 1845 ntBASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 DRAXINP1-201ENST00000437611 948 ntBASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 AP002414.4-201ENST00000589764 1148 ntBASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 GNAS-203ENST00000306120 1878 ntBASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 KRT18P1-202ENST00000452408 1331 ntBASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TTC39BQ5VTQ0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 TSPY12P-201ENST00000421279 868 ntBASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 AP002383.4-201ENST00000442518 975 ntBASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 AC092329.2-201ENST00000598402 547 ntBASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 AL592071.1-201ENST00000611956 408 ntBASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TTC39BQ5VTQ0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
TTC39BQ5VTQ0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TTC39BQ5VTQ0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.64■□□□□ 0.58
TTC39BQ5VTQ0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 AC134043.2-201ENST00000624206 2238 ntBASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 VENTXP7-201ENST00000475503 772 ntBASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 AC092119.3-201ENST00000612618 583 ntBASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 AC009154.2-201ENST00000621177 724 ntBASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TTC39BQ5VTQ0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms