Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TNNI3KQ59H18 NOC2LP1-202ENST00000452600 2235 ntBASIC21.83■■□□□ 1.08
TNNI3KQ59H18 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 AKR1C7P-201ENST00000305623 895 ntBASIC21.82■■□□□ 1.08
TNNI3KQ59H18 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TNNI3KQ59H18 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 FAM220CP-201ENST00000395253 831 ntBASIC21.81■■□□□ 1.08
TNNI3KQ59H18 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 RN7SL510P-201ENST00000581311 263 ntBASIC21.81■■□□□ 1.08
TNNI3KQ59H18 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 AL121894.2-201ENST00000602977 491 ntBASIC21.81■■□□□ 1.08
TNNI3KQ59H18 AC116407.2-201ENST00000613639 860 ntBASIC21.81■■□□□ 1.08
TNNI3KQ59H18 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TNNI3KQ59H18 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 COX5BP2-201ENST00000392354 334 ntBASIC21.8■■□□□ 1.08
TNNI3KQ59H18 DDX43P3-201ENST00000441064 443 ntBASIC21.8■■□□□ 1.08
TNNI3KQ59H18 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TNNI3KQ59H18 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.79■■□□□ 1.08
TNNI3KQ59H18 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms