Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 H19-201ENST00000411754 1788 ntTSL 5 BASIC9.04□□□□□ -0.96
LINC01554Q52M75 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LINC01554Q52M75 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 NID2-208ENST00000617139 3827 ntTSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 HYI-206ENST00000372434 1025 ntTSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 TESC-206ENST00000541210 936 ntTSL 3 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 AP001160.3-201ENST00000601484 763 ntBASIC9.03□□□□□ -0.96
LINC01554Q52M75 AC110285.6-201ENST00000617652 491 ntBASIC9.03□□□□□ -0.96
LINC01554Q52M75 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 AC145098.2-201ENST00000623593 3026 ntBASIC9.03□□□□□ -0.96
LINC01554Q52M75 KCP-203ENST00000610776 5108 ntTSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 STK25-205ENST00000405883 1904 ntTSL 2 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LINC01554Q52M75 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC9.03□□□□□ -0.96
LINC01554Q52M75 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
LINC01554Q52M75 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
LINC01554Q52M75 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
LINC01554Q52M75 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
LINC01554Q52M75 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
LINC01554Q52M75 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.96
LINC01554Q52M75 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
LINC01554Q52M75 POM121L4P-202ENST00000427789 1891 ntBASIC9.02□□□□□ -0.96
LINC01554Q52M75 Z82202.1-201ENST00000623446 1880 ntBASIC9.02□□□□□ -0.96
LINC01554Q52M75 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC9.02□□□□□ -0.96
LINC01554Q52M75 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
LINC01554Q52M75 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC9.02□□□□□ -0.97
LINC01554Q52M75 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms