Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 AC096633.1-201ENST00000422446 749 ntBASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 AL353801.3-201ENST00000609898 542 ntBASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 AC108860.2-201ENST00000562760 2183 ntBASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RSPO1Q2MKA7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 AL845331.1-201ENST00000424978 1190 ntBASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 LINC01451-201ENST00000623792 534 ntBASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 AL121956.5-201ENST00000625261 221 ntBASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 FZD10-202ENST00000539839 3282 ntBASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 SIRPAP1-201ENST00000448467 1770 ntBASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RSPO1Q2MKA7 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.46■□□□□ 0.07
RSPO1Q2MKA7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RSPO1Q2MKA7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.46■□□□□ 0.07
RSPO1Q2MKA7 HLA-J-201ENST00000462773 1622 ntBASIC15.46■□□□□ 0.07
RSPO1Q2MKA7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RSPO1Q2MKA7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RSPO1Q2MKA7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RSPO1Q2MKA7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RSPO1Q2MKA7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RSPO1Q2MKA7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.46■□□□□ 0.07
RSPO1Q2MKA7 AC005332.1-201ENST00000577698 1310 ntBASIC15.46■□□□□ 0.07
RSPO1Q2MKA7 AC097374.2-201ENST00000618617 1306 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms