Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
GABREP78334 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GABREP78334 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GABREP78334 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GABREP78334 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
GABREP78334 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GABREP78334 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GABREP78334 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.98■□□□□ 0.31
GABREP78334 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
GABREP78334 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GABREP78334 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.98■□□□□ 0.31
GABREP78334 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GABREP78334 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
GABREP78334 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
GABREP78334 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.98■□□□□ 0.31
GABREP78334 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GABREP78334 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GABREP78334 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
GABREP78334 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GABREP78334 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
GABREP78334 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.98■□□□□ 0.31
GABREP78334 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.98■□□□□ 0.31
GABREP78334 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.98■□□□□ 0.31
GABREP78334 PGM5P2-202ENST00000637225 1043 ntBASIC16.98■□□□□ 0.31
GABREP78334 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
GABREP78334 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.98■□□□□ 0.31
GABREP78334 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GABREP78334 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GABREP78334 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GABREP78334 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.98■□□□□ 0.31
GABREP78334 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
GABREP78334 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
GABREP78334 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GABREP78334 TNXA-203ENST00000507684 2038 ntBASIC16.97■□□□□ 0.31
GABREP78334 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABREP78334 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.97■□□□□ 0.31
GABREP78334 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
GABREP78334 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
GABREP78334 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABREP78334 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GABREP78334 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
GABREP78334 AL161938.1-201ENST00000569833 2180 ntBASIC16.97■□□□□ 0.31
GABREP78334 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.97■□□□□ 0.31
GABREP78334 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABREP78334 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.97■□□□□ 0.31
GABREP78334 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABREP78334 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
GABREP78334 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
GABREP78334 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
GABREP78334 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.97■□□□□ 0.31
GABREP78334 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.97■□□□□ 0.31
GABREP78334 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.97■□□□□ 0.31
GABREP78334 AC108751.1-201ENST00000490852 363 ntBASIC16.97■□□□□ 0.31
GABREP78334 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GABREP78334 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.97■□□□□ 0.31
GABREP78334 AC006557.2-201ENST00000592985 1240 ntBASIC16.97■□□□□ 0.31
GABREP78334 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.97■□□□□ 0.31
GABREP78334 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.97■□□□□ 0.31
GABREP78334 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.97■□□□□ 0.31
GABREP78334 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABREP78334 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GABREP78334 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABREP78334 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABREP78334 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABREP78334 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GABREP78334 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.97■□□□□ 0.31
GABREP78334 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
GABREP78334 KRT18P28-201ENST00000453838 1332 ntBASIC16.96■□□□□ 0.31
GABREP78334 AC097374.2-201ENST00000618617 1306 ntBASIC16.96■□□□□ 0.31
GABREP78334 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
GABREP78334 AC079776.2-201ENST00000641154 1609 ntBASIC16.96■□□□□ 0.31
GABREP78334 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABREP78334 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
GABREP78334 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.96■□□□□ 0.31
GABREP78334 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABREP78334 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
GABREP78334 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABREP78334 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.96■□□□□ 0.31
GABREP78334 METTL21AP1-201ENST00000438852 635 ntBASIC16.96■□□□□ 0.31
GABREP78334 AP006288.1-201ENST00000446065 395 ntBASIC16.96■□□□□ 0.31
GABREP78334 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.96■□□□□ 0.31
GABREP78334 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABREP78334 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.96■□□□□ 0.31
GABREP78334 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.96■□□□□ 0.31
GABREP78334 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
GABREP78334 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.96■□□□□ 0.31
GABREP78334 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
GABREP78334 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.96■□□□□ 0.31
GABREP78334 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GABREP78334 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.96■□□□□ 0.31
GABREP78334 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.96■□□□□ 0.31
GABREP78334 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABREP78334 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABREP78334 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GABREP78334 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.96■□□□□ 0.31
GABREP78334 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABREP78334 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
GABREP78334 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
GABREP78334 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GABREP78334 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms