Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RPS3AP61247 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RPS3AP61247 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.83■□□□□ 0.28
RPS3AP61247 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.83■□□□□ 0.28
RPS3AP61247 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 AC139887.4-201ENST00000607877 719 ntBASIC16.83■□□□□ 0.28
RPS3AP61247 AC010331.1-201ENST00000611423 582 ntBASIC16.83■□□□□ 0.28
RPS3AP61247 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.83■□□□□ 0.28
RPS3AP61247 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
RPS3AP61247 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RPS3AP61247 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPS3AP61247 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
RPS3AP61247 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RPS3AP61247 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.82■□□□□ 0.28
RPS3AP61247 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS3AP61247 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS3AP61247 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS3AP61247 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RPS3AP61247 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS3AP61247 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS3AP61247 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.82■□□□□ 0.28
RPS3AP61247 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RPS3AP61247 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS3AP61247 KRT8P32-201ENST00000512863 1461 ntBASIC16.82■□□□□ 0.28
RPS3AP61247 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS3AP61247 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS3AP61247 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
RPS3AP61247 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS3AP61247 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS3AP61247 RNF152P1-201ENST00000397754 604 ntBASIC16.82■□□□□ 0.28
RPS3AP61247 AC117947.1-201ENST00000427448 529 ntBASIC16.82■□□□□ 0.28
RPS3AP61247 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.82■□□□□ 0.28
RPS3AP61247 AC092647.4-201ENST00000457211 535 ntBASIC16.82■□□□□ 0.28
RPS3AP61247 DUX4L26-201ENST00000489078 1255 ntBASIC16.82■□□□□ 0.28
RPS3AP61247 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.82■□□□□ 0.28
RPS3AP61247 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.82■□□□□ 0.28
RPS3AP61247 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS3AP61247 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS3AP61247 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS3AP61247 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
RPS3AP61247 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.82■□□□□ 0.28
RPS3AP61247 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
RPS3AP61247 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.82■□□□□ 0.28
RPS3AP61247 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS3AP61247 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS3AP61247 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
RPS3AP61247 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPS3AP61247 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.82■□□□□ 0.28
RPS3AP61247 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS3AP61247 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPS3AP61247 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS3AP61247 AC036111.1-201ENST00000533973 1582 ntBASIC16.81■□□□□ 0.28
RPS3AP61247 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPS3AP61247 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RPS3AP61247 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS3AP61247 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPS3AP61247 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPS3AP61247 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS3AP61247 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS3AP61247 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPS3AP61247 NKILA-202ENST00000614771 2598 ntBASIC16.81■□□□□ 0.28
RPS3AP61247 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS3AP61247 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.81■□□□□ 0.28
RPS3AP61247 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RPS3AP61247 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.81■□□□□ 0.28
RPS3AP61247 AC104076.2-201ENST00000448912 469 ntBASIC16.81■□□□□ 0.28
RPS3AP61247 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.81■□□□□ 0.28
RPS3AP61247 YBX1P2-201ENST00000489612 999 ntBASIC16.81■□□□□ 0.28
RPS3AP61247 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.81■□□□□ 0.28
RPS3AP61247 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.81■□□□□ 0.28
RPS3AP61247 AC006011.2-201ENST00000621313 1158 ntBASIC16.81■□□□□ 0.28
RPS3AP61247 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPS3AP61247 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RPS3AP61247 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.81■□□□□ 0.28
RPS3AP61247 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS3AP61247 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS3AP61247 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS3AP61247 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS3AP61247 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RPS3AP61247 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS3AP61247 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RPS3AP61247 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS3AP61247 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS3AP61247 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RPS3AP61247 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPS3AP61247 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RPS3AP61247 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS3AP61247 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPS3AP61247 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RPS3AP61247 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.8■□□□□ 0.28
RPS3AP61247 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS3AP61247 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.8■□□□□ 0.28
RPS3AP61247 TSPY5P-201ENST00000426936 936 ntBASIC16.8■□□□□ 0.28
RPS3AP61247 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms