Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
AP3S2P59780 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3S2P59780 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
AP3S2P59780 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S2P59780 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S2P59780 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S2P59780 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3S2P59780 AC006015.1-201ENST00000429970 570 ntBASIC15.4■□□□□ 0.06
AP3S2P59780 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3S2P59780 PRKY-204ENST00000533551 1019 ntBASIC15.4■□□□□ 0.06
AP3S2P59780 HLA-B-256ENST00000639848 1089 ntBASIC15.4■□□□□ 0.06
AP3S2P59780 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S2P59780 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
AP3S2P59780 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S2P59780 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S2P59780 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
AP3S2P59780 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3S2P59780 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.4■□□□□ 0.06
AP3S2P59780 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.4■□□□□ 0.06
AP3S2P59780 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S2P59780 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
AP3S2P59780 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S2P59780 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S2P59780 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3S2P59780 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3S2P59780 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3S2P59780 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
AP3S2P59780 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.39■□□□□ 0.05
AP3S2P59780 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
AP3S2P59780 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
AP3S2P59780 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
AP3S2P59780 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.39■□□□□ 0.05
AP3S2P59780 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
AP3S2P59780 DUSP5P2-201ENST00000426873 1033 ntBASIC15.39■□□□□ 0.05
AP3S2P59780 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
AP3S2P59780 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.39■□□□□ 0.05
AP3S2P59780 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.39■□□□□ 0.05
AP3S2P59780 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
AP3S2P59780 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
AP3S2P59780 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 AC009102.3-201ENST00000623118 1491 ntBASIC15.39■□□□□ 0.05
AP3S2P59780 HLA-J-201ENST00000462773 1622 ntBASIC15.39■□□□□ 0.05
AP3S2P59780 AC034236.2-201ENST00000606662 1610 ntBASIC15.39■□□□□ 0.05
AP3S2P59780 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
AP3S2P59780 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
AP3S2P59780 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S2P59780 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.38■□□□□ 0.05
AP3S2P59780 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP3S2P59780 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.38■□□□□ 0.05
AP3S2P59780 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.38■□□□□ 0.05
AP3S2P59780 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP3S2P59780 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
AP3S2P59780 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.38■□□□□ 0.05
AP3S2P59780 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP3S2P59780 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP3S2P59780 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP3S2P59780 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP3S2P59780 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP3S2P59780 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
AP3S2P59780 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
AP3S2P59780 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
AP3S2P59780 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.38■□□□□ 0.05
AP3S2P59780 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP3S2P59780 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP3S2P59780 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
AP3S2P59780 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP3S2P59780 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
AP3S2P59780 MIR564-202ENST00000385049 94 ntBASIC15.38■□□□□ 0.05
AP3S2P59780 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.38■□□□□ 0.05
AP3S2P59780 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.38■□□□□ 0.05
AP3S2P59780 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.38■□□□□ 0.05
AP3S2P59780 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
AP3S2P59780 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
AP3S2P59780 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP3S2P59780 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.38■□□□□ 0.05
AP3S2P59780 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.38■□□□□ 0.05
AP3S2P59780 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.38■□□□□ 0.05
AP3S2P59780 AF201337.1-201ENST00000520239 748 ntBASIC15.38■□□□□ 0.05
AP3S2P59780 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.38■□□□□ 0.05
AP3S2P59780 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
AP3S2P59780 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.38■□□□□ 0.05
AP3S2P59780 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms