Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ITGA8P53708 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ITGA8P53708 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ITGA8P53708 AL390955.1-201ENST00000428694 934 ntBASIC18.4■□□□□ 0.54
ITGA8P53708 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ITGA8P53708 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ITGA8P53708 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ITGA8P53708 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.4■□□□□ 0.54
ITGA8P53708 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ITGA8P53708 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ITGA8P53708 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.4■□□□□ 0.54
ITGA8P53708 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.4■□□□□ 0.54
ITGA8P53708 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ITGA8P53708 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.4■□□□□ 0.54
ITGA8P53708 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ITGA8P53708 Z99916.2-201ENST00000604037 246 ntBASIC18.4■□□□□ 0.54
ITGA8P53708 AP000525.1-201ENST00000608286 694 ntBASIC18.4■□□□□ 0.54
ITGA8P53708 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ITGA8P53708 AC116562.4-202ENST00000641738 218 ntBASIC18.4■□□□□ 0.54
ITGA8P53708 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ITGA8P53708 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ITGA8P53708 AC124067.4-201ENST00000519691 2379 ntBASIC18.4■□□□□ 0.54
ITGA8P53708 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ITGA8P53708 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.4■□□□□ 0.54
ITGA8P53708 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ITGA8P53708 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ITGA8P53708 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
ITGA8P53708 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ITGA8P53708 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ITGA8P53708 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.39■□□□□ 0.54
ITGA8P53708 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.39■□□□□ 0.54
ITGA8P53708 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
ITGA8P53708 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.39■□□□□ 0.54
ITGA8P53708 AC011676.5-201ENST00000624864 2660 ntBASIC18.39■□□□□ 0.54
ITGA8P53708 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
ITGA8P53708 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.39■□□□□ 0.53
ITGA8P53708 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.39■□□□□ 0.53
ITGA8P53708 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
ITGA8P53708 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.39■□□□□ 0.53
ITGA8P53708 SEC1P-202ENST00000473944 940 ntBASIC18.39■□□□□ 0.53
ITGA8P53708 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ITGA8P53708 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.39■□□□□ 0.53
ITGA8P53708 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ITGA8P53708 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.39■□□□□ 0.53
ITGA8P53708 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ITGA8P53708 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.39■□□□□ 0.53
ITGA8P53708 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ITGA8P53708 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
ITGA8P53708 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.39■□□□□ 0.53
ITGA8P53708 AC022898.2-201ENST00000616822 1312 ntBASIC18.39■□□□□ 0.53
ITGA8P53708 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ITGA8P53708 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ITGA8P53708 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ITGA8P53708 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ITGA8P53708 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ITGA8P53708 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.39■□□□□ 0.53
ITGA8P53708 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ITGA8P53708 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.39■□□□□ 0.53
ITGA8P53708 LINC00167-201ENST00000530583 1419 ntBASIC18.39■□□□□ 0.53
ITGA8P53708 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITGA8P53708 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ITGA8P53708 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ITGA8P53708 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.38■□□□□ 0.53
ITGA8P53708 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ITGA8P53708 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ITGA8P53708 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ITGA8P53708 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ITGA8P53708 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.38■□□□□ 0.53
ITGA8P53708 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITGA8P53708 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITGA8P53708 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITGA8P53708 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITGA8P53708 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITGA8P53708 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.38■□□□□ 0.53
ITGA8P53708 FITM1-202ENST00000559294 800 ntBASIC18.38■□□□□ 0.53
ITGA8P53708 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.38■□□□□ 0.53
ITGA8P53708 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.38■□□□□ 0.53
ITGA8P53708 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ITGA8P53708 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITGA8P53708 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ITGA8P53708 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ITGA8P53708 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ITGA8P53708 HLA-J-201ENST00000462773 1622 ntBASIC18.38■□□□□ 0.53
ITGA8P53708 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITGA8P53708 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.37■□□□□ 0.53
ITGA8P53708 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ITGA8P53708 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.37■□□□□ 0.53
ITGA8P53708 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ITGA8P53708 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ITGA8P53708 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ITGA8P53708 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ITGA8P53708 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ITGA8P53708 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ITGA8P53708 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ITGA8P53708 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ITGA8P53708 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ITGA8P53708 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.37■□□□□ 0.53
ITGA8P53708 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ITGA8P53708 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.37■□□□□ 0.53
ITGA8P53708 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms