Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKAP51800 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKAP51800 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKAP51800 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKAP51800 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
CLCNKAP51800 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKAP51800 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKAP51800 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCNKAP51800 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKAP51800 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKAP51800 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCNKAP51800 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.55■□□□□ 0.4
CLCNKAP51800 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CLCNKAP51800 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.55■□□□□ 0.4
CLCNKAP51800 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKAP51800 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.55■□□□□ 0.4
CLCNKAP51800 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKAP51800 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKAP51800 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKAP51800 AC090340.1-201ENST00000620778 4980 ntBASIC17.55■□□□□ 0.4
CLCNKAP51800 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKAP51800 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCNKAP51800 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.55■□□□□ 0.4
CLCNKAP51800 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.55■□□□□ 0.4
CLCNKAP51800 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.55■□□□□ 0.4
CLCNKAP51800 LINC01711-201ENST00000598340 967 ntBASIC17.55■□□□□ 0.4
CLCNKAP51800 AC114341.1-201ENST00000618070 349 ntBASIC17.55■□□□□ 0.4
CLCNKAP51800 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKAP51800 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCNKAP51800 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCNKAP51800 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKAP51800 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKAP51800 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKAP51800 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CLCNKAP51800 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
CLCNKAP51800 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.54■□□□□ 0.4
CLCNKAP51800 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CLCNKAP51800 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 BICD1-207ENST00000551848 1962 ntBASIC17.54■□□□□ 0.4
CLCNKAP51800 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.54■□□□□ 0.4
CLCNKAP51800 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.54■□□□□ 0.4
CLCNKAP51800 FAAHP1-202ENST00000446499 1238 ntBASIC17.54■□□□□ 0.4
CLCNKAP51800 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 UNC93B7-201ENST00000509439 705 ntBASIC17.54■□□□□ 0.4
CLCNKAP51800 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.54■□□□□ 0.4
CLCNKAP51800 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.54■□□□□ 0.4
CLCNKAP51800 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.54■□□□□ 0.4
CLCNKAP51800 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.54■□□□□ 0.4
CLCNKAP51800 AC138894.3-201ENST00000603787 634 ntBASIC17.54■□□□□ 0.4
CLCNKAP51800 IFNL4P1-201ENST00000607083 540 ntBASIC17.54■□□□□ 0.4
CLCNKAP51800 AL732292.2-201ENST00000609649 430 ntBASIC17.54■□□□□ 0.4
CLCNKAP51800 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.54■□□□□ 0.4
CLCNKAP51800 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.54■□□□□ 0.4
CLCNKAP51800 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CLCNKAP51800 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLCNKAP51800 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CLCNKAP51800 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CLCNKAP51800 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CLCNKAP51800 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLCNKAP51800 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCNKAP51800 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCNKAP51800 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.53■□□□□ 0.4
CLCNKAP51800 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CLCNKAP51800 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLCNKAP51800 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCNKAP51800 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCNKAP51800 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.53■□□□□ 0.4
CLCNKAP51800 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCNKAP51800 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCNKAP51800 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCNKAP51800 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCNKAP51800 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.53■□□□□ 0.4
CLCNKAP51800 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.53■□□□□ 0.4
CLCNKAP51800 RN7SL510P-201ENST00000581311 263 ntBASIC17.53■□□□□ 0.4
CLCNKAP51800 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CLCNKAP51800 AC011467.2-201ENST00000598425 242 ntBASIC17.53■□□□□ 0.4
CLCNKAP51800 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.53■□□□□ 0.4
CLCNKAP51800 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.53■□□□□ 0.4
CLCNKAP51800 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.53■□□□□ 0.4
CLCNKAP51800 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCNKAP51800 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCNKAP51800 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLCNKAP51800 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLCNKAP51800 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms