Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLK2P49760 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLK2P49760 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.25■□□□□ 0.83
CLK2P49760 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.25■□□□□ 0.83
CLK2P49760 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.25■□□□□ 0.83
CLK2P49760 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLK2P49760 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLK2P49760 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.25■□□□□ 0.83
CLK2P49760 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLK2P49760 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.25■□□□□ 0.83
CLK2P49760 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLK2P49760 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.25■□□□□ 0.83
CLK2P49760 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLK2P49760 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLK2P49760 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.25■□□□□ 0.83
CLK2P49760 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLK2P49760 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.25■□□□□ 0.83
CLK2P49760 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLK2P49760 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.25■□□□□ 0.83
CLK2P49760 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLK2P49760 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.25■□□□□ 0.83
CLK2P49760 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLK2P49760 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK2P49760 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK2P49760 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK2P49760 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK2P49760 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLK2P49760 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.24■□□□□ 0.83
CLK2P49760 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CLK2P49760 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.24■□□□□ 0.83
CLK2P49760 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK2P49760 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK2P49760 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.24■□□□□ 0.83
CLK2P49760 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLK2P49760 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.24■□□□□ 0.83
CLK2P49760 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CLK2P49760 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.24■□□□□ 0.83
CLK2P49760 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.24■□□□□ 0.83
CLK2P49760 AC111152.3-201ENST00000569699 673 ntBASIC20.24■□□□□ 0.83
CLK2P49760 REXO1L6P-202ENST00000619970 1078 ntBASIC20.24■□□□□ 0.83
CLK2P49760 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLK2P49760 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLK2P49760 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.24■□□□□ 0.83
CLK2P49760 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.24■□□□□ 0.83
CLK2P49760 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK2P49760 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.24■□□□□ 0.83
CLK2P49760 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK2P49760 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK2P49760 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.24■□□□□ 0.83
CLK2P49760 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK2P49760 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK2P49760 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLK2P49760 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.23■□□□□ 0.83
CLK2P49760 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.23■□□□□ 0.83
CLK2P49760 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLK2P49760 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CLK2P49760 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CLK2P49760 BX276092.7-203ENST00000637198 1536 ntBASIC20.23■□□□□ 0.83
CLK2P49760 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.23■□□□□ 0.83
CLK2P49760 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CLK2P49760 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CLK2P49760 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLK2P49760 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.23■□□□□ 0.83
CLK2P49760 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLK2P49760 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLK2P49760 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.23■□□□□ 0.83
CLK2P49760 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLK2P49760 AC132008.2-207ENST00000454517 770 ntBASIC20.23■□□□□ 0.83
CLK2P49760 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.23■□□□□ 0.83
CLK2P49760 AL691432.3-201ENST00000621860 400 ntBASIC20.23■□□□□ 0.83
CLK2P49760 AD001527.2-201ENST00000622994 785 ntBASIC20.23■□□□□ 0.83
CLK2P49760 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLK2P49760 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CLK2P49760 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.23■□□□□ 0.83
CLK2P49760 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CLK2P49760 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.23■□□□□ 0.83
CLK2P49760 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLK2P49760 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.23■□□□□ 0.83
CLK2P49760 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLK2P49760 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLK2P49760 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CLK2P49760 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.22■□□□□ 0.83
CLK2P49760 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLK2P49760 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLK2P49760 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLK2P49760 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLK2P49760 AC007613.1-201ENST00000572811 2597 ntBASIC20.22■□□□□ 0.83
CLK2P49760 REXO1L11P-201ENST00000620964 1927 ntBASIC20.22■□□□□ 0.83
CLK2P49760 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLK2P49760 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.22■□□□□ 0.83
CLK2P49760 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLK2P49760 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLK2P49760 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLK2P49760 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.22■□□□□ 0.83
CLK2P49760 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.22■□□□□ 0.83
CLK2P49760 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.22■□□□□ 0.83
CLK2P49760 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.22■□□□□ 0.83
CLK2P49760 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLK2P49760 EMBP1-201ENST00000458200 901 ntBASIC20.22■□□□□ 0.83
CLK2P49760 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms