Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SSR1P43307 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SSR1P43307 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSR1P43307 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSR1P43307 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SSR1P43307 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSR1P43307 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SSR1P43307 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSR1P43307 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
SSR1P43307 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.08■□□□□ 0.64
SSR1P43307 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.07■□□□□ 0.64
SSR1P43307 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.07■□□□□ 0.64
SSR1P43307 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
SSR1P43307 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.07■□□□□ 0.64
SSR1P43307 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.07■□□□□ 0.64
SSR1P43307 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.07■□□□□ 0.64
SSR1P43307 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.07■□□□□ 0.64
SSR1P43307 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.07■□□□□ 0.64
SSR1P43307 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.07■□□□□ 0.64
SSR1P43307 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SSR1P43307 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SSR1P43307 AC092865.7-201ENST00000641832 219 ntBASIC19.07■□□□□ 0.64
SSR1P43307 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
SSR1P43307 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.07■□□□□ 0.64
SSR1P43307 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 GNAS-203ENST00000306120 1878 ntBASIC19.07■□□□□ 0.64
SSR1P43307 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.07■□□□□ 0.64
SSR1P43307 AL024508.2-201ENST00000607749 1894 ntBASIC19.07■□□□□ 0.64
SSR1P43307 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.07■□□□□ 0.64
SSR1P43307 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR1P43307 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SSR1P43307 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SSR1P43307 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SSR1P43307 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSR1P43307 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SSR1P43307 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
SSR1P43307 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSR1P43307 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSR1P43307 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.06■□□□□ 0.64
SSR1P43307 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.06■□□□□ 0.64
SSR1P43307 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSR1P43307 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.06■□□□□ 0.64
SSR1P43307 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSR1P43307 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSR1P43307 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.06■□□□□ 0.64
SSR1P43307 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.06■□□□□ 0.64
SSR1P43307 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.06■□□□□ 0.64
SSR1P43307 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SSR1P43307 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SSR1P43307 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSR1P43307 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSR1P43307 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSR1P43307 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSR1P43307 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.06■□□□□ 0.64
SSR1P43307 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR1P43307 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR1P43307 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SSR1P43307 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
SSR1P43307 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SSR1P43307 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.05■□□□□ 0.64
SSR1P43307 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR1P43307 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SSR1P43307 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR1P43307 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR1P43307 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR1P43307 AC087499.1-201ENST00000418141 1075 ntBASIC19.05■□□□□ 0.64
SSR1P43307 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.05■□□□□ 0.64
SSR1P43307 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR1P43307 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.05■□□□□ 0.64
SSR1P43307 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.05■□□□□ 0.64
SSR1P43307 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SSR1P43307 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.05■□□□□ 0.64
SSR1P43307 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR1P43307 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SSR1P43307 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR1P43307 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR1P43307 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR1P43307 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SSR1P43307 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR1P43307 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SSR1P43307 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SSR1P43307 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR1P43307 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms