Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HADHAP40939 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HADHAP40939 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
HADHAP40939 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HADHAP40939 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
HADHAP40939 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
HADHAP40939 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
HADHAP40939 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
HADHAP40939 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
HADHAP40939 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HADHAP40939 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HADHAP40939 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HADHAP40939 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HADHAP40939 AC006116.8-202ENST00000587620 1550 ntBASIC18.14■□□□□ 0.49
HADHAP40939 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HADHAP40939 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HADHAP40939 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HADHAP40939 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.14■□□□□ 0.49
HADHAP40939 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HADHAP40939 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HADHAP40939 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HADHAP40939 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HADHAP40939 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.14■□□□□ 0.49
HADHAP40939 KRT18P48-201ENST00000434763 852 ntBASIC18.14■□□□□ 0.49
HADHAP40939 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.14■□□□□ 0.49
HADHAP40939 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.14■□□□□ 0.49
HADHAP40939 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.14■□□□□ 0.49
HADHAP40939 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HADHAP40939 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HADHAP40939 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HADHAP40939 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HADHAP40939 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HADHAP40939 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HADHAP40939 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
HADHAP40939 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HADHAP40939 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HADHAP40939 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
HADHAP40939 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
HADHAP40939 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HADHAP40939 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HADHAP40939 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HADHAP40939 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HADHAP40939 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HADHAP40939 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
HADHAP40939 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HADHAP40939 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HADHAP40939 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HADHAP40939 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HADHAP40939 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
HADHAP40939 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HADHAP40939 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HADHAP40939 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HADHAP40939 HBZP1-201ENST00000354915 429 ntBASIC18.13■□□□□ 0.49
HADHAP40939 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HADHAP40939 AC092597.1-201ENST00000487352 616 ntBASIC18.13■□□□□ 0.49
HADHAP40939 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.13■□□□□ 0.49
HADHAP40939 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HADHAP40939 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.13■□□□□ 0.49
HADHAP40939 AL445228.2-201ENST00000605589 952 ntBASIC18.13■□□□□ 0.49
HADHAP40939 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HADHAP40939 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.13■□□□□ 0.49
HADHAP40939 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.13■□□□□ 0.49
HADHAP40939 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HADHAP40939 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HADHAP40939 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HADHAP40939 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HADHAP40939 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HADHAP40939 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HADHAP40939 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HADHAP40939 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HADHAP40939 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HADHAP40939 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HADHAP40939 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HADHAP40939 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
HADHAP40939 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.12■□□□□ 0.49
HADHAP40939 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HADHAP40939 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.12■□□□□ 0.49
HADHAP40939 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HADHAP40939 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HADHAP40939 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.12■□□□□ 0.49
HADHAP40939 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HADHAP40939 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.12■□□□□ 0.49
HADHAP40939 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.12■□□□□ 0.49
HADHAP40939 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HADHAP40939 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HADHAP40939 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.12■□□□□ 0.49
HADHAP40939 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.12■□□□□ 0.49
HADHAP40939 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.12■□□□□ 0.49
HADHAP40939 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.12■□□□□ 0.49
HADHAP40939 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.12■□□□□ 0.49
HADHAP40939 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.12■□□□□ 0.49
HADHAP40939 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HADHAP40939 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.12■□□□□ 0.49
HADHAP40939 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.12■□□□□ 0.49
HADHAP40939 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HADHAP40939 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HADHAP40939 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HADHAP40939 LINC01311-201ENST00000565162 1445 ntBASIC18.12■□□□□ 0.49
HADHAP40939 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
HADHAP40939 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms