Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC3P40938 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RFC3P40938 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC3P40938 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC3P40938 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.39■□□□□ 0.21
RFC3P40938 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.39■□□□□ 0.21
RFC3P40938 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.39■□□□□ 0.21
RFC3P40938 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.39■□□□□ 0.21
RFC3P40938 AL160237.2-201ENST00000556165 472 ntBASIC16.39■□□□□ 0.21
RFC3P40938 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC3P40938 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.39■□□□□ 0.21
RFC3P40938 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.39■□□□□ 0.21
RFC3P40938 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC3P40938 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.39■□□□□ 0.21
RFC3P40938 AL121912.1-201ENST00000603683 238 ntBASIC16.39■□□□□ 0.21
RFC3P40938 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RFC3P40938 PCDHB18P-201ENST00000524813 2368 ntBASIC16.39■□□□□ 0.21
RFC3P40938 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RFC3P40938 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RFC3P40938 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RFC3P40938 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
RFC3P40938 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC3P40938 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.39■□□□□ 0.21
RFC3P40938 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.39■□□□□ 0.21
RFC3P40938 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC3P40938 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.38■□□□□ 0.21
RFC3P40938 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFC3P40938 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RFC3P40938 AL133373.2-201ENST00000623187 2828 ntBASIC16.38■□□□□ 0.21
RFC3P40938 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.38■□□□□ 0.21
RFC3P40938 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFC3P40938 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFC3P40938 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.38■□□□□ 0.21
RFC3P40938 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFC3P40938 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFC3P40938 RCN1P2-201ENST00000398357 915 ntBASIC16.38■□□□□ 0.21
RFC3P40938 SAPCD2P3-201ENST00000455031 850 ntBASIC16.38■□□□□ 0.21
RFC3P40938 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
RFC3P40938 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFC3P40938 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.38■□□□□ 0.21
RFC3P40938 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
RFC3P40938 AF238378.1-201ENST00000526806 358 ntBASIC16.38■□□□□ 0.21
RFC3P40938 AP002469.2-201ENST00000531724 424 ntBASIC16.38■□□□□ 0.21
RFC3P40938 MIR5100-201ENST00000579544 119 ntBASIC16.38■□□□□ 0.21
RFC3P40938 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFC3P40938 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.38■□□□□ 0.21
RFC3P40938 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFC3P40938 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.38■□□□□ 0.21
RFC3P40938 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RFC3P40938 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
RFC3P40938 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
RFC3P40938 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.38■□□□□ 0.21
RFC3P40938 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
RFC3P40938 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RFC3P40938 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
RFC3P40938 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC3P40938 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC3P40938 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFC3P40938 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC3P40938 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC3P40938 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC3P40938 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RFC3P40938 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RFC3P40938 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RFC3P40938 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC3P40938 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC3P40938 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC3P40938 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.37■□□□□ 0.21
RFC3P40938 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.37■□□□□ 0.21
RFC3P40938 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RFC3P40938 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC3P40938 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC3P40938 MRPL3P1-201ENST00000400109 1033 ntBASIC16.37■□□□□ 0.21
RFC3P40938 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC3P40938 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.37■□□□□ 0.21
RFC3P40938 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC3P40938 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFC3P40938 AC114341.1-201ENST00000618070 349 ntBASIC16.37■□□□□ 0.21
RFC3P40938 REXO1L6P-202ENST00000619970 1078 ntBASIC16.37■□□□□ 0.21
RFC3P40938 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC3P40938 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
RFC3P40938 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.37■□□□□ 0.21
RFC3P40938 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFC3P40938 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RFC3P40938 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RFC3P40938 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFC3P40938 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.36■□□□□ 0.21
RFC3P40938 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFC3P40938 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFC3P40938 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFC3P40938 TP73-AS1-210ENST00000637775 1455 ntBASIC16.36■□□□□ 0.21
RFC3P40938 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFC3P40938 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFC3P40938 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
RFC3P40938 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFC3P40938 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFC3P40938 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
RFC3P40938 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.36■□□□□ 0.21
RFC3P40938 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFC3P40938 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms