Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PDE6BP35913 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDE6BP35913 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDE6BP35913 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
PDE6BP35913 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
PDE6BP35913 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PDE6BP35913 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDE6BP35913 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.95■■□□□ 1.1
PDE6BP35913 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
PDE6BP35913 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PDE6BP35913 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.95■■□□□ 1.1
PDE6BP35913 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.95■■□□□ 1.1
PDE6BP35913 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.95■■□□□ 1.1
PDE6BP35913 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PDE6BP35913 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.95■■□□□ 1.1
PDE6BP35913 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC21.95■■□□□ 1.1
PDE6BP35913 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.95■■□□□ 1.1
PDE6BP35913 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.95■■□□□ 1.1
PDE6BP35913 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.95■■□□□ 1.1
PDE6BP35913 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.95■■□□□ 1.1
PDE6BP35913 AC027612.4-201ENST00000605371 583 ntBASIC21.95■■□□□ 1.1
PDE6BP35913 AC004877.2-201ENST00000623941 599 ntBASIC21.95■■□□□ 1.1
PDE6BP35913 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.95■■□□□ 1.1
PDE6BP35913 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PDE6BP35913 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.95■■□□□ 1.1
PDE6BP35913 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PDE6BP35913 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.95■■□□□ 1.1
PDE6BP35913 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PDE6BP35913 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDE6BP35913 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDE6BP35913 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDE6BP35913 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDE6BP35913 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.95■■□□□ 1.1
PDE6BP35913 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDE6BP35913 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PDE6BP35913 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6BP35913 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6BP35913 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6BP35913 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.94■■□□□ 1.1
PDE6BP35913 MRPL20P1-201ENST00000400819 433 ntBASIC21.94■■□□□ 1.1
PDE6BP35913 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC21.94■■□□□ 1.1
PDE6BP35913 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.94■■□□□ 1.1
PDE6BP35913 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6BP35913 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.94■■□□□ 1.1
PDE6BP35913 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6BP35913 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.94■■□□□ 1.1
PDE6BP35913 AC096734.2-201ENST00000562054 433 ntBASIC21.94■■□□□ 1.1
PDE6BP35913 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6BP35913 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.94■■□□□ 1.1
PDE6BP35913 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
PDE6BP35913 ANO7L1-203ENST00000602586 1720 ntBASIC21.94■■□□□ 1.1
PDE6BP35913 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6BP35913 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6BP35913 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6BP35913 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDE6BP35913 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6BP35913 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6BP35913 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PDE6BP35913 AC003669.1-201ENST00000334569 611 ntBASIC21.93■■□□□ 1.1
PDE6BP35913 CALY-203ENST00000368558 825 ntTSL 5 BASIC21.93■■□□□ 1.1
PDE6BP35913 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6BP35913 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.93■■□□□ 1.1
PDE6BP35913 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6BP35913 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.93■■□□□ 1.1
PDE6BP35913 KLF4P1-201ENST00000412782 1185 ntBASIC21.93■■□□□ 1.1
PDE6BP35913 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6BP35913 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6BP35913 ACTG1P14-201ENST00000446382 1122 ntBASIC21.93■■□□□ 1.1
PDE6BP35913 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PDE6BP35913 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.93■■□□□ 1.1
PDE6BP35913 CFL1-212ENST00000531413 636 ntTSL 3 BASIC21.93■■□□□ 1.1
PDE6BP35913 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.93■■□□□ 1.1
PDE6BP35913 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6BP35913 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
PDE6BP35913 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PDE6BP35913 AL805961.1-202ENST00000641562 540 ntBASIC21.93■■□□□ 1.1
PDE6BP35913 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.93■■□□□ 1.1
PDE6BP35913 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.92■■□□□ 1.1
PDE6BP35913 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDE6BP35913 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
PDE6BP35913 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDE6BP35913 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDE6BP35913 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDE6BP35913 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PDE6BP35913 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.92■■□□□ 1.1
PDE6BP35913 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.92■■□□□ 1.1
PDE6BP35913 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDE6BP35913 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.92■■□□□ 1.1
PDE6BP35913 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDE6BP35913 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDE6BP35913 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PDE6BP35913 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PDE6BP35913 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.92■■□□□ 1.1
PDE6BP35913 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.92■■□□□ 1.1
PDE6BP35913 AP000344.2-201ENST00000512987 629 ntBASIC21.92■■□□□ 1.1
PDE6BP35913 DUTP2-201ENST00000519164 463 ntBASIC21.92■■□□□ 1.1
PDE6BP35913 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.92■■□□□ 1.1
PDE6BP35913 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC21.92■■□□□ 1.1
PDE6BP35913 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.92■■□□□ 1.1
PDE6BP35913 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms