Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 AC011270.2-201ENST00000624293 2550 ntBASIC17.07■□□□□ 0.32
KRT20P35900 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT20P35900 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT20P35900 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT20P35900 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT20P35900 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
KRT20P35900 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.06■□□□□ 0.32
KRT20P35900 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT20P35900 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
KRT20P35900 PCDHA12-202ENST00000613593 2588 ntBASIC17.06■□□□□ 0.32
KRT20P35900 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
KRT20P35900 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT20P35900 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT20P35900 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT20P35900 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT20P35900 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT20P35900 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
KRT20P35900 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
KRT20P35900 SLC25A6P5-201ENST00000435663 894 ntBASIC17.06■□□□□ 0.32
KRT20P35900 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT20P35900 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
KRT20P35900 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT20P35900 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT20P35900 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT20P35900 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
KRT20P35900 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
KRT20P35900 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
KRT20P35900 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT20P35900 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT20P35900 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT20P35900 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
KRT20P35900 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
KRT20P35900 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT20P35900 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT20P35900 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT20P35900 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
KRT20P35900 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT20P35900 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
KRT20P35900 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT20P35900 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT20P35900 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT20P35900 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT20P35900 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT20P35900 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT20P35900 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT20P35900 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT20P35900 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT20P35900 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT20P35900 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT20P35900 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT20P35900 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT20P35900 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.05■□□□□ 0.32
KRT20P35900 TMPOP1-202ENST00000424642 1267 ntBASIC17.05■□□□□ 0.32
KRT20P35900 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.05■□□□□ 0.32
KRT20P35900 AC092647.4-201ENST00000457211 535 ntBASIC17.05■□□□□ 0.32
KRT20P35900 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
KRT20P35900 KRT18P21-201ENST00000515767 1272 ntBASIC17.05■□□□□ 0.32
KRT20P35900 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT20P35900 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
KRT20P35900 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT20P35900 MIR3180-4-201ENST00000582223 153 ntBASIC17.05■□□□□ 0.32
KRT20P35900 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
KRT20P35900 AC010240.3-201ENST00000607688 395 ntBASIC17.05■□□□□ 0.32
KRT20P35900 AC139887.4-201ENST00000607877 719 ntBASIC17.05■□□□□ 0.32
KRT20P35900 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT20P35900 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT20P35900 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
KRT20P35900 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT20P35900 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT20P35900 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
KRT20P35900 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
KRT20P35900 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT20P35900 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT20P35900 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT20P35900 AC073508.3-201ENST00000619697 1419 ntBASIC17.04■□□□□ 0.32
KRT20P35900 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT20P35900 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT20P35900 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT20P35900 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT20P35900 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT20P35900 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
KRT20P35900 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT20P35900 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT20P35900 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.04■□□□□ 0.32
KRT20P35900 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT20P35900 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT20P35900 AK4P3-201ENST00000418260 669 ntBASIC17.04■□□□□ 0.32
KRT20P35900 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT20P35900 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms