Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.38■■□□□ 1.17
RFC4P35249 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
RFC4P35249 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RFC4P35249 ANO7L1-203ENST00000602586 1720 ntBASIC22.38■■□□□ 1.17
RFC4P35249 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RFC4P35249 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
RFC4P35249 CALY-203ENST00000368558 825 ntTSL 5 BASIC22.38■■□□□ 1.17
RFC4P35249 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC22.38■■□□□ 1.17
RFC4P35249 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC22.38■■□□□ 1.17
RFC4P35249 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC22.38■■□□□ 1.17
RFC4P35249 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC22.38■■□□□ 1.17
RFC4P35249 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC22.38■■□□□ 1.17
RFC4P35249 PDPK2P-202ENST00000562415 1191 ntBASIC22.38■■□□□ 1.17
RFC4P35249 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC22.38■■□□□ 1.17
RFC4P35249 AC004877.2-201ENST00000623941 599 ntBASIC22.38■■□□□ 1.17
RFC4P35249 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RFC4P35249 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RFC4P35249 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RFC4P35249 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RFC4P35249 AL049757.1-201ENST00000616842 1596 ntBASIC22.38■■□□□ 1.17
RFC4P35249 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
RFC4P35249 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.37■■□□□ 1.17
RFC4P35249 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
RFC4P35249 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RFC4P35249 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
RFC4P35249 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
RFC4P35249 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
RFC4P35249 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RFC4P35249 IGLL3P-201ENST00000412472 434 ntBASIC22.37■■□□□ 1.17
RFC4P35249 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC22.37■■□□□ 1.17
RFC4P35249 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
RFC4P35249 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RFC4P35249 SIGLEC30P-201ENST00000455569 941 ntBASIC22.37■■□□□ 1.17
RFC4P35249 PUS1-205ENST00000535067 838 ntTSL 3 BASIC22.37■■□□□ 1.17
RFC4P35249 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RFC4P35249 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC22.37■■□□□ 1.17
RFC4P35249 AC010654.1-201ENST00000615722 808 ntBASIC22.37■■□□□ 1.17
RFC4P35249 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RFC4P35249 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
RFC4P35249 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RFC4P35249 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
RFC4P35249 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RFC4P35249 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RFC4P35249 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RFC4P35249 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.36■■□□□ 1.17
RFC4P35249 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RFC4P35249 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RFC4P35249 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RFC4P35249 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
RFC4P35249 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
RFC4P35249 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RFC4P35249 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RFC4P35249 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
RFC4P35249 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
RFC4P35249 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC22.36■■□□□ 1.17
RFC4P35249 S100A2-206ENST00000497140 697 ntTSL 2 BASIC22.36■■□□□ 1.17
RFC4P35249 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC22.36■■□□□ 1.17
RFC4P35249 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC22.36■■□□□ 1.17
RFC4P35249 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC22.36■■□□□ 1.17
RFC4P35249 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
RFC4P35249 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RFC4P35249 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RFC4P35249 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC22.36■■□□□ 1.17
RFC4P35249 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RFC4P35249 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.36■■□□□ 1.17
RFC4P35249 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RFC4P35249 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RFC4P35249 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RFC4P35249 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
RFC4P35249 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
RFC4P35249 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RFC4P35249 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RFC4P35249 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RFC4P35249 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC22.35■■□□□ 1.17
RFC4P35249 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC22.35■■□□□ 1.17
RFC4P35249 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
RFC4P35249 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RFC4P35249 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC22.35■■□□□ 1.17
RFC4P35249 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RFC4P35249 MRPL20P1-201ENST00000400819 433 ntBASIC22.35■■□□□ 1.17
RFC4P35249 KLF4P1-201ENST00000412782 1185 ntBASIC22.35■■□□□ 1.17
RFC4P35249 ATP6V0CP3-201ENST00000417255 467 ntBASIC22.35■■□□□ 1.17
RFC4P35249 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC22.35■■□□□ 1.17
RFC4P35249 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC22.35■■□□□ 1.17
RFC4P35249 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC22.35■■□□□ 1.17
RFC4P35249 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC22.35■■□□□ 1.17
RFC4P35249 METTL23-205ENST00000588302 925 ntTSL 5 BASIC22.35■■□□□ 1.17
RFC4P35249 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC22.35■■□□□ 1.17
RFC4P35249 AC093028.1-201ENST00000622998 982 ntBASIC22.35■■□□□ 1.17
RFC4P35249 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RFC4P35249 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RFC4P35249 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.35■■□□□ 1.17
RFC4P35249 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC22.35■■□□□ 1.17
RFC4P35249 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RFC4P35249 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RFC4P35249 BCAR1-209ENST00000546196 1340 ntBASIC22.34■■□□□ 1.17
RFC4P35249 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC22.34■■□□□ 1.17
RFC4P35249 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC22.34■■□□□ 1.17
RFC4P35249 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RFC4P35249 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms