Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.34■□□□□ 0.85
CNGA1P29973 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNGA1P29973 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.34■□□□□ 0.85
CNGA1P29973 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.34■□□□□ 0.85
CNGA1P29973 AC007967.2-201ENST00000432613 625 ntBASIC20.34■□□□□ 0.85
CNGA1P29973 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.34■□□□□ 0.85
CNGA1P29973 DNAJB3-201ENST00000446806 729 ntBASIC20.34■□□□□ 0.85
CNGA1P29973 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNGA1P29973 AC105339.3-201ENST00000560043 636 ntBASIC20.34■□□□□ 0.85
CNGA1P29973 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNGA1P29973 AC027796.2-201ENST00000575326 344 ntBASIC20.34■□□□□ 0.85
CNGA1P29973 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.34■□□□□ 0.85
CNGA1P29973 MTDHP4-201ENST00000600287 670 ntBASIC20.34■□□□□ 0.85
CNGA1P29973 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNGA1P29973 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.34■□□□□ 0.85
CNGA1P29973 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNGA1P29973 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNGA1P29973 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNGA1P29973 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNGA1P29973 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNGA1P29973 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.34■□□□□ 0.85
CNGA1P29973 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNGA1P29973 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.34■□□□□ 0.85
CNGA1P29973 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNGA1P29973 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNGA1P29973 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CNGA1P29973 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.33■□□□□ 0.85
CNGA1P29973 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNGA1P29973 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.33■□□□□ 0.85
CNGA1P29973 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CNGA1P29973 RNA5SP416-201ENST00000516838 111 ntBASIC20.33■□□□□ 0.85
CNGA1P29973 NKAPP1-205ENST00000585790 367 ntBASIC20.33■□□□□ 0.85
CNGA1P29973 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNGA1P29973 AL139288.1-201ENST00000623748 933 ntBASIC20.33■□□□□ 0.85
CNGA1P29973 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNGA1P29973 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNGA1P29973 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNGA1P29973 MYLKP1-201ENST00000509077 1580 ntBASIC20.33■□□□□ 0.84
CNGA1P29973 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.33■□□□□ 0.84
CNGA1P29973 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CNGA1P29973 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNGA1P29973 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.33■□□□□ 0.84
CNGA1P29973 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNGA1P29973 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNGA1P29973 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNGA1P29973 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNGA1P29973 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNGA1P29973 AP002414.3-201ENST00000589352 1468 ntBASIC20.32■□□□□ 0.84
CNGA1P29973 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNGA1P29973 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNGA1P29973 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.32■□□□□ 0.84
CNGA1P29973 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CNGA1P29973 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNGA1P29973 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CNGA1P29973 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CNGA1P29973 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.32■□□□□ 0.84
CNGA1P29973 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CNGA1P29973 UNC93B6-202ENST00000528242 690 ntBASIC20.32■□□□□ 0.84
CNGA1P29973 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.32■□□□□ 0.84
CNGA1P29973 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.32■□□□□ 0.84
CNGA1P29973 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CNGA1P29973 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNGA1P29973 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CNGA1P29973 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.32■□□□□ 0.84
CNGA1P29973 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.32■□□□□ 0.84
CNGA1P29973 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNGA1P29973 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.32■□□□□ 0.84
CNGA1P29973 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNGA1P29973 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNGA1P29973 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNGA1P29973 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNGA1P29973 AC026471.1-201ENST00000564629 3026 ntBASIC20.32■□□□□ 0.84
CNGA1P29973 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CNGA1P29973 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.31■□□□□ 0.84
CNGA1P29973 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNGA1P29973 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.31■□□□□ 0.84
CNGA1P29973 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNGA1P29973 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CNGA1P29973 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.31■□□□□ 0.84
CNGA1P29973 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.31■□□□□ 0.84
CNGA1P29973 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNGA1P29973 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.31■□□□□ 0.84
CNGA1P29973 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.31■□□□□ 0.84
CNGA1P29973 AC004967.1-201ENST00000453589 447 ntBASIC20.31■□□□□ 0.84
CNGA1P29973 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNGA1P29973 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.31■□□□□ 0.84
CNGA1P29973 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.31■□□□□ 0.84
CNGA1P29973 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNGA1P29973 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.31■□□□□ 0.84
CNGA1P29973 AL138781.2-201ENST00000617896 1843 ntBASIC20.31■□□□□ 0.84
CNGA1P29973 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CNGA1P29973 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNGA1P29973 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNGA1P29973 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNGA1P29973 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.31■□□□□ 0.84
CNGA1P29973 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.31■□□□□ 0.84
CNGA1P29973 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CNGA1P29973 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNGA1P29973 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CNGA1P29973 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms