Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
GDF1P27539 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.23■□□□□ 0.19
GDF1P27539 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.23■□□□□ 0.19
GDF1P27539 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
GDF1P27539 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.23■□□□□ 0.19
GDF1P27539 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.23■□□□□ 0.19
GDF1P27539 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
GDF1P27539 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
GDF1P27539 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
GDF1P27539 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
GDF1P27539 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
GDF1P27539 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDF1P27539 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
GDF1P27539 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.22■□□□□ 0.19
GDF1P27539 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDF1P27539 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDF1P27539 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
GDF1P27539 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GDF1P27539 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.22■□□□□ 0.19
GDF1P27539 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
GDF1P27539 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDF1P27539 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.22■□□□□ 0.19
GDF1P27539 RCN1P2-201ENST00000398357 915 ntBASIC16.22■□□□□ 0.19
GDF1P27539 AC026396.1-201ENST00000419388 421 ntBASIC16.22■□□□□ 0.19
GDF1P27539 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.22■□□□□ 0.19
GDF1P27539 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.22■□□□□ 0.19
GDF1P27539 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.22■□□□□ 0.19
GDF1P27539 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.22■□□□□ 0.19
GDF1P27539 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.22■□□□□ 0.19
GDF1P27539 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.22■□□□□ 0.19
GDF1P27539 MIR5100-201ENST00000579544 119 ntBASIC16.22■□□□□ 0.19
GDF1P27539 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
GDF1P27539 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
GDF1P27539 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GDF1P27539 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.22■□□□□ 0.19
GDF1P27539 REXO1L9P-201ENST00000604264 2108 ntBASIC16.22■□□□□ 0.19
GDF1P27539 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDF1P27539 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
GDF1P27539 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDF1P27539 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
GDF1P27539 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GDF1P27539 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDF1P27539 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDF1P27539 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GDF1P27539 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.22■□□□□ 0.19
GDF1P27539 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GDF1P27539 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDF1P27539 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.21■□□□□ 0.19
GDF1P27539 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
GDF1P27539 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDF1P27539 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
GDF1P27539 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.21■□□□□ 0.19
GDF1P27539 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.21■□□□□ 0.19
GDF1P27539 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDF1P27539 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDF1P27539 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDF1P27539 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDF1P27539 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDF1P27539 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
GDF1P27539 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.21■□□□□ 0.19
GDF1P27539 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDF1P27539 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GDF1P27539 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
GDF1P27539 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GDF1P27539 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.21■□□□□ 0.19
GDF1P27539 DUTP2-201ENST00000519164 463 ntBASIC16.21■□□□□ 0.19
GDF1P27539 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
GDF1P27539 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
GDF1P27539 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GDF1P27539 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.21■□□□□ 0.19
GDF1P27539 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
GDF1P27539 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.21■□□□□ 0.19
GDF1P27539 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.21■□□□□ 0.19
GDF1P27539 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDF1P27539 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDF1P27539 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
GDF1P27539 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDF1P27539 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDF1P27539 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.21■□□□□ 0.19
GDF1P27539 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
GDF1P27539 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GDF1P27539 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GDF1P27539 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.21■□□□□ 0.18
GDF1P27539 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GDF1P27539 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GDF1P27539 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.21■□□□□ 0.18
GDF1P27539 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
GDF1P27539 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms