Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCND1P24385 AP000593.1-201ENST00000393668 712 ntBASIC18.06■□□□□ 0.48
CCND1P24385 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCND1P24385 HMGA1P5-201ENST00000412453 271 ntBASIC18.06■□□□□ 0.48
CCND1P24385 AC087499.1-201ENST00000418141 1075 ntBASIC18.06■□□□□ 0.48
CCND1P24385 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCND1P24385 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCND1P24385 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CCND1P24385 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.06■□□□□ 0.48
CCND1P24385 MIR4674-201ENST00000582457 87 ntBASIC18.06■□□□□ 0.48
CCND1P24385 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCND1P24385 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
CCND1P24385 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CCND1P24385 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCND1P24385 KRT8P7-201ENST00000533003 1432 ntBASIC18.06■□□□□ 0.48
CCND1P24385 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCND1P24385 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCND1P24385 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.06■□□□□ 0.48
CCND1P24385 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCND1P24385 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.05■□□□□ 0.48
CCND1P24385 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.05■□□□□ 0.48
CCND1P24385 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.05■□□□□ 0.48
CCND1P24385 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCND1P24385 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.05■□□□□ 0.48
CCND1P24385 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.05■□□□□ 0.48
CCND1P24385 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.05■□□□□ 0.48
CCND1P24385 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.05■□□□□ 0.48
CCND1P24385 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 AC145285.6-201ENST00000604632 637 ntBASIC18.05■□□□□ 0.48
CCND1P24385 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.05■□□□□ 0.48
CCND1P24385 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCND1P24385 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCND1P24385 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.05■□□□□ 0.48
CCND1P24385 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.05■□□□□ 0.48
CCND1P24385 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CCND1P24385 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
CCND1P24385 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCND1P24385 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCND1P24385 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCND1P24385 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCND1P24385 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CCND1P24385 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CCND1P24385 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CCND1P24385 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CCND1P24385 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCND1P24385 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCND1P24385 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCND1P24385 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCND1P24385 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCND1P24385 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.04■□□□□ 0.48
CCND1P24385 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCND1P24385 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.04■□□□□ 0.48
CCND1P24385 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCND1P24385 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.04■□□□□ 0.48
CCND1P24385 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCND1P24385 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.04■□□□□ 0.48
CCND1P24385 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.04■□□□□ 0.48
CCND1P24385 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCND1P24385 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.04■□□□□ 0.48
CCND1P24385 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CCND1P24385 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.04■□□□□ 0.48
CCND1P24385 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CCND1P24385 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCND1P24385 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCND1P24385 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CCND1P24385 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.04■□□□□ 0.48
CCND1P24385 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.04■□□□□ 0.48
CCND1P24385 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCND1P24385 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCND1P24385 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CCND1P24385 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.03■□□□□ 0.48
CCND1P24385 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms