Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD58P19256 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD58P19256 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD58P19256 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.24■□□□□ 0.67
CD58P19256 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD58P19256 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CD58P19256 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD58P19256 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.24■□□□□ 0.67
CD58P19256 IGHV3-41-201ENST00000613121 348 ntBASIC19.24■□□□□ 0.67
CD58P19256 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.24■□□□□ 0.67
CD58P19256 AC093458.2-201ENST00000623150 629 ntBASIC19.24■□□□□ 0.67
CD58P19256 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD58P19256 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD58P19256 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.24■□□□□ 0.67
CD58P19256 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD58P19256 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD58P19256 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD58P19256 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD58P19256 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CD58P19256 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD58P19256 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CD58P19256 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CD58P19256 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD58P19256 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD58P19256 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.24■□□□□ 0.67
CD58P19256 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD58P19256 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.23■□□□□ 0.67
CD58P19256 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD58P19256 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CD58P19256 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.23■□□□□ 0.67
CD58P19256 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD58P19256 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CD58P19256 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.23■□□□□ 0.67
CD58P19256 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CD58P19256 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD58P19256 TSSC2-201ENST00000450217 709 ntBASIC19.23■□□□□ 0.67
CD58P19256 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.23■□□□□ 0.67
CD58P19256 GUSBP12-201ENST00000513727 720 ntBASIC19.23■□□□□ 0.67
CD58P19256 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CD58P19256 DUTP2-201ENST00000519164 463 ntBASIC19.23■□□□□ 0.67
CD58P19256 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CD58P19256 AL592071.1-201ENST00000611956 408 ntBASIC19.23■□□□□ 0.67
CD58P19256 AC124864.1-201ENST00000623408 392 ntBASIC19.23■□□□□ 0.67
CD58P19256 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.23■□□□□ 0.67
CD58P19256 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CD58P19256 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CD58P19256 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CD58P19256 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.23■□□□□ 0.67
CD58P19256 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CD58P19256 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CD58P19256 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.23■□□□□ 0.67
CD58P19256 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD58P19256 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD58P19256 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD58P19256 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD58P19256 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CD58P19256 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CD58P19256 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CD58P19256 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.22■□□□□ 0.67
CD58P19256 CHCHD2P8-201ENST00000429873 447 ntBASIC19.22■□□□□ 0.67
CD58P19256 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
CD58P19256 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CD58P19256 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.22■□□□□ 0.67
CD58P19256 AC069148.1-201ENST00000608741 768 ntBASIC19.22■□□□□ 0.67
CD58P19256 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.22■□□□□ 0.67
CD58P19256 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.22■□□□□ 0.67
CD58P19256 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.22■□□□□ 0.67
CD58P19256 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CD58P19256 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.22■□□□□ 0.67
CD58P19256 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CD58P19256 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.22■□□□□ 0.67
CD58P19256 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.22■□□□□ 0.67
CD58P19256 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD58P19256 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CD58P19256 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CD58P19256 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CD58P19256 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD58P19256 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CD58P19256 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD58P19256 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CD58P19256 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms