Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CXCL1P09341 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
CXCL1P09341 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
CXCL1P09341 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL1P09341 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL1P09341 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL1P09341 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.92□□□□□ -0.18
CXCL1P09341 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL1P09341 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.92□□□□□ -0.18
CXCL1P09341 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.92□□□□□ -0.18
CXCL1P09341 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.92□□□□□ -0.18
CXCL1P09341 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL1P09341 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL1P09341 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL1P09341 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL1P09341 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.92□□□□□ -0.18
CXCL1P09341 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL1P09341 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CXCL1P09341 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CXCL1P09341 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC13.91□□□□□ -0.18
CXCL1P09341 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CXCL1P09341 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CXCL1P09341 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.91□□□□□ -0.18
CXCL1P09341 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CXCL1P09341 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.91□□□□□ -0.18
CXCL1P09341 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CXCL1P09341 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.91□□□□□ -0.18
CXCL1P09341 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.91□□□□□ -0.18
CXCL1P09341 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.91□□□□□ -0.18
CXCL1P09341 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.91□□□□□ -0.18
CXCL1P09341 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.91□□□□□ -0.18
CXCL1P09341 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.91□□□□□ -0.18
CXCL1P09341 AC087623.3-201ENST00000607047 1098 ntBASIC13.91□□□□□ -0.18
CXCL1P09341 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CXCL1P09341 AL121829.2-201ENST00000620908 328 ntBASIC13.91□□□□□ -0.18
CXCL1P09341 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.91□□□□□ -0.18
CXCL1P09341 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CXCL1P09341 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CXCL1P09341 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.91□□□□□ -0.18
CXCL1P09341 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.91□□□□□ -0.18
CXCL1P09341 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CXCL1P09341 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.91□□□□□ -0.18
CXCL1P09341 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CXCL1P09341 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.9□□□□□ -0.18
CXCL1P09341 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CXCL1P09341 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CXCL1P09341 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 AC124283.5-201ENST00000624661 1809 ntBASIC13.9□□□□□ -0.18
CXCL1P09341 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CXCL1P09341 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.9□□□□□ -0.18
CXCL1P09341 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CXCL1P09341 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 BX276092.2-201ENST00000417668 665 ntBASIC13.9□□□□□ -0.18
CXCL1P09341 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CXCL1P09341 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CXCL1P09341 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.9□□□□□ -0.18
CXCL1P09341 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.9□□□□□ -0.18
CXCL1P09341 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.9□□□□□ -0.18
CXCL1P09341 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CXCL1P09341 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CXCL1P09341 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CXCL1P09341 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CXCL1P09341 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms