Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A2P08123 FLJ13224-201ENST00000313737 1514 ntBASIC19.57■□□□□ 0.72
COL1A2P08123 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A2P08123 MIR574-201ENST00000385209 96 ntBASIC19.57■□□□□ 0.72
COL1A2P08123 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.57■□□□□ 0.72
COL1A2P08123 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A2P08123 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.57■□□□□ 0.72
COL1A2P08123 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.57■□□□□ 0.72
COL1A2P08123 AC012640.2-201ENST00000561606 901 ntBASIC19.57■□□□□ 0.72
COL1A2P08123 AC145285.3-201ENST00000564603 959 ntBASIC19.57■□□□□ 0.72
COL1A2P08123 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.57■□□□□ 0.72
COL1A2P08123 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A2P08123 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A2P08123 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A2P08123 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A2P08123 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.56■□□□□ 0.72
COL1A2P08123 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.56■□□□□ 0.72
COL1A2P08123 SIRPAP1-201ENST00000448467 1770 ntBASIC19.56■□□□□ 0.72
COL1A2P08123 REXO1L9P-201ENST00000604264 2108 ntBASIC19.56■□□□□ 0.72
COL1A2P08123 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A2P08123 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.56■□□□□ 0.72
COL1A2P08123 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.56■□□□□ 0.72
COL1A2P08123 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A2P08123 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.56■□□□□ 0.72
COL1A2P08123 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A2P08123 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.56■□□□□ 0.72
COL1A2P08123 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.56■□□□□ 0.72
COL1A2P08123 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.56■□□□□ 0.72
COL1A2P08123 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
COL1A2P08123 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.56■□□□□ 0.72
COL1A2P08123 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
COL1A2P08123 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.56■□□□□ 0.72
COL1A2P08123 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.56■□□□□ 0.72
COL1A2P08123 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A2P08123 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL1A2P08123 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.56■□□□□ 0.72
COL1A2P08123 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
COL1A2P08123 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.55■□□□□ 0.72
COL1A2P08123 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
COL1A2P08123 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.55■□□□□ 0.72
COL1A2P08123 AC009949.1-201ENST00000623048 1830 ntBASIC19.55■□□□□ 0.72
COL1A2P08123 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.55■□□□□ 0.72
COL1A2P08123 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 AC003669.1-201ENST00000334569 611 ntBASIC19.55■□□□□ 0.72
COL1A2P08123 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.55■□□□□ 0.72
COL1A2P08123 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 KLF4P1-201ENST00000412782 1185 ntBASIC19.55■□□□□ 0.72
COL1A2P08123 AL020989.1-201ENST00000422979 469 ntBASIC19.55■□□□□ 0.72
COL1A2P08123 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
COL1A2P08123 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.55■□□□□ 0.72
COL1A2P08123 RPL13AP23-201ENST00000480739 586 ntBASIC19.55■□□□□ 0.72
COL1A2P08123 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.55■□□□□ 0.72
COL1A2P08123 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.55■□□□□ 0.72
COL1A2P08123 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.55■□□□□ 0.72
COL1A2P08123 AC105339.3-201ENST00000560043 636 ntBASIC19.55■□□□□ 0.72
COL1A2P08123 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.55■□□□□ 0.72
COL1A2P08123 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.55■□□□□ 0.72
COL1A2P08123 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL1A2P08123 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.54■□□□□ 0.72
COL1A2P08123 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A2P08123 KRT18P55-202ENST00000578578 1546 ntBASIC19.54■□□□□ 0.72
COL1A2P08123 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.54■□□□□ 0.72
COL1A2P08123 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.54■□□□□ 0.72
COL1A2P08123 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A2P08123 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A2P08123 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A2P08123 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A2P08123 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.54■□□□□ 0.72
COL1A2P08123 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A2P08123 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
COL1A2P08123 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
COL1A2P08123 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
COL1A2P08123 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A2P08123 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.54■□□□□ 0.72
COL1A2P08123 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.54■□□□□ 0.72
COL1A2P08123 AC132938.5-201ENST00000624980 1813 ntBASIC19.54■□□□□ 0.72
COL1A2P08123 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A2P08123 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL1A2P08123 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.54■□□□□ 0.72
COL1A2P08123 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.54■□□□□ 0.72
COL1A2P08123 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.54■□□□□ 0.72
COL1A2P08123 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.54■□□□□ 0.72
COL1A2P08123 AC098831.1-202ENST00000438821 336 ntBASIC19.54■□□□□ 0.72
COL1A2P08123 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms