Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RHOP08100 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RHOP08100 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RHOP08100 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.47■□□□□ 0.55
RHOP08100 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RHOP08100 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RHOP08100 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.47■□□□□ 0.55
RHOP08100 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RHOP08100 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RHOP08100 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.47■□□□□ 0.55
RHOP08100 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.47■□□□□ 0.55
RHOP08100 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.47■□□□□ 0.55
RHOP08100 DNAJB3-201ENST00000446806 729 ntBASIC18.47■□□□□ 0.55
RHOP08100 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RHOP08100 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RHOP08100 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.47■□□□□ 0.55
RHOP08100 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.47■□□□□ 0.55
RHOP08100 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.47■□□□□ 0.55
RHOP08100 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.47■□□□□ 0.55
RHOP08100 MIR3687-2-201ENST00000577708 61 ntBASIC18.47■□□□□ 0.55
RHOP08100 MIR3687-1-201ENST00000614492 61 ntBASIC18.47■□□□□ 0.55
RHOP08100 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.47■□□□□ 0.55
RHOP08100 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RHOP08100 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RHOP08100 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RHOP08100 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RHOP08100 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RHOP08100 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.47■□□□□ 0.55
RHOP08100 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RHOP08100 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
RHOP08100 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RHOP08100 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RHOP08100 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
RHOP08100 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RHOP08100 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
RHOP08100 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RHOP08100 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RHOP08100 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RHOP08100 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RHOP08100 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RHOP08100 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.46■□□□□ 0.55
RHOP08100 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.46■□□□□ 0.55
RHOP08100 AL020989.1-201ENST00000422979 469 ntBASIC18.46■□□□□ 0.55
RHOP08100 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RHOP08100 AC108751.1-201ENST00000490852 363 ntBASIC18.46■□□□□ 0.55
RHOP08100 AC112482.1-201ENST00000492080 688 ntBASIC18.46■□□□□ 0.55
RHOP08100 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.46■□□□□ 0.55
RHOP08100 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
RHOP08100 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RHOP08100 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RHOP08100 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.46■□□□□ 0.55
RHOP08100 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.46■□□□□ 0.55
RHOP08100 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.46■□□□□ 0.55
RHOP08100 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.46■□□□□ 0.55
RHOP08100 AL589182.2-201ENST00000619332 1049 ntBASIC18.46■□□□□ 0.55
RHOP08100 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.46■□□□□ 0.55
RHOP08100 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RHOP08100 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RHOP08100 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RHOP08100 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RHOP08100 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.46■□□□□ 0.55
RHOP08100 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RHOP08100 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RHOP08100 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RHOP08100 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RHOP08100 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RHOP08100 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RHOP08100 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RHOP08100 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
RHOP08100 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.46■□□□□ 0.54
RHOP08100 AL353593.2-201ENST00000602529 1483 ntBASIC18.46■□□□□ 0.54
RHOP08100 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHOP08100 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.45■□□□□ 0.54
RHOP08100 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RHOP08100 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.45■□□□□ 0.54
RHOP08100 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHOP08100 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHOP08100 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHOP08100 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RHOP08100 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHOP08100 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RHOP08100 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RHOP08100 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.45■□□□□ 0.54
RHOP08100 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.45■□□□□ 0.54
RHOP08100 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.45■□□□□ 0.54
RHOP08100 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.45■□□□□ 0.54
RHOP08100 AC004832.2-201ENST00000426397 482 ntBASIC18.45■□□□□ 0.54
RHOP08100 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.45■□□□□ 0.54
RHOP08100 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.45■□□□□ 0.54
RHOP08100 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RHOP08100 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.45■□□□□ 0.54
RHOP08100 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.45■□□□□ 0.54
RHOP08100 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.45■□□□□ 0.54
RHOP08100 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.45■□□□□ 0.54
RHOP08100 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.45■□□□□ 0.54
RHOP08100 AC002347.1-201ENST00000569543 541 ntBASIC18.45■□□□□ 0.54
RHOP08100 AC064836.3-201ENST00000607928 673 ntBASIC18.45■□□□□ 0.54
RHOP08100 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.45■□□□□ 0.54
RHOP08100 AL049757.1-201ENST00000616842 1596 ntBASIC18.45■□□□□ 0.54
RHOP08100 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms