Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.53■□□□□ 0.4
WNT1P04628 AC055717.3-201ENST00000622967 595 ntBASIC17.53■□□□□ 0.4
WNT1P04628 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
WNT1P04628 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
WNT1P04628 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT1P04628 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT1P04628 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT1P04628 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
WNT1P04628 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
WNT1P04628 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.53■□□□□ 0.4
WNT1P04628 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
WNT1P04628 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT1P04628 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
WNT1P04628 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.53■□□□□ 0.4
WNT1P04628 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
WNT1P04628 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.53■□□□□ 0.4
WNT1P04628 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
WNT1P04628 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
WNT1P04628 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
WNT1P04628 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.52■□□□□ 0.4
WNT1P04628 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
WNT1P04628 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
WNT1P04628 AC026471.1-201ENST00000564629 3026 ntBASIC17.52■□□□□ 0.4
WNT1P04628 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
WNT1P04628 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
WNT1P04628 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
WNT1P04628 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.52■□□□□ 0.4
WNT1P04628 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
WNT1P04628 AC005104.2-201ENST00000427818 678 ntBASIC17.52■□□□□ 0.4
WNT1P04628 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.52■□□□□ 0.4
WNT1P04628 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.52■□□□□ 0.4
WNT1P04628 KRT18P3-201ENST00000451602 1288 ntBASIC17.52■□□□□ 0.4
WNT1P04628 AC092183.1-201ENST00000469884 875 ntBASIC17.52■□□□□ 0.4
WNT1P04628 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
WNT1P04628 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
WNT1P04628 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.52■□□□□ 0.4
WNT1P04628 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.52■□□□□ 0.4
WNT1P04628 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.52■□□□□ 0.4
WNT1P04628 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.52■□□□□ 0.4
WNT1P04628 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
WNT1P04628 AC073592.4-201ENST00000623827 446 ntBASIC17.52■□□□□ 0.4
WNT1P04628 AL022326.1-202ENST00000641533 845 ntBASIC17.52■□□□□ 0.4
WNT1P04628 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
WNT1P04628 CROCCP3-202ENST00000420820 1947 ntBASIC17.52■□□□□ 0.4
WNT1P04628 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
WNT1P04628 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
WNT1P04628 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
WNT1P04628 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
WNT1P04628 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
WNT1P04628 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.52■□□□□ 0.39
WNT1P04628 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.52■□□□□ 0.39
WNT1P04628 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
WNT1P04628 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
WNT1P04628 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
WNT1P04628 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
WNT1P04628 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
WNT1P04628 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
WNT1P04628 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
WNT1P04628 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT1P04628 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT1P04628 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
WNT1P04628 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
WNT1P04628 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT1P04628 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT1P04628 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT1P04628 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT1P04628 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
WNT1P04628 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
WNT1P04628 AL591424.1-201ENST00000442569 1213 ntBASIC17.51■□□□□ 0.39
WNT1P04628 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT1P04628 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
WNT1P04628 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
WNT1P04628 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.51■□□□□ 0.39
WNT1P04628 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.51■□□□□ 0.39
WNT1P04628 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT1P04628 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT1P04628 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
WNT1P04628 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT1P04628 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
WNT1P04628 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.51■□□□□ 0.39
WNT1P04628 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT1P04628 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.5■□□□□ 0.39
WNT1P04628 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
WNT1P04628 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
WNT1P04628 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
WNT1P04628 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT1P04628 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT1P04628 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT1P04628 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
WNT1P04628 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT1P04628 AIRN-201ENST00000601203 4374 ntBASIC17.5■□□□□ 0.39
WNT1P04628 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT1P04628 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
WNT1P04628 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
WNT1P04628 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.5■□□□□ 0.39
WNT1P04628 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
WNT1P04628 AC009947.1-201ENST00000444350 727 ntBASIC17.5■□□□□ 0.39
WNT1P04628 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.5■□□□□ 0.39
WNT1P04628 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.5■□□□□ 0.39
WNT1P04628 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms