Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
APOBP04114 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 AC055876.3-201ENST00000431496 288 ntBASIC11.08□□□□□ -0.64
APOBP04114 FAM58CP-201ENST00000435741 640 ntBASIC11.08□□□□□ -0.64
APOBP04114 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
APOBP04114 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.08□□□□□ -0.64
APOBP04114 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC11.08□□□□□ -0.64
APOBP04114 AC138649.4-201ENST00000612222 287 ntBASIC11.08□□□□□ -0.64
APOBP04114 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.08□□□□□ -0.64
APOBP04114 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
APOBP04114 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
APOBP04114 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC11.08□□□□□ -0.64
APOBP04114 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
APOBP04114 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.08□□□□□ -0.64
APOBP04114 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.08□□□□□ -0.64
APOBP04114 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC11.08□□□□□ -0.64
APOBP04114 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
APOBP04114 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
APOBP04114 CRYGEP-201ENST00000412192 528 ntBASIC11.08□□□□□ -0.64
APOBP04114 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.08□□□□□ -0.64
APOBP04114 NKTR-203ENST00000442970 646 ntTSL 2 BASIC11.08□□□□□ -0.64
APOBP04114 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
APOBP04114 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
APOBP04114 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
APOBP04114 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC11.07□□□□□ -0.64
APOBP04114 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOBP04114 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC11.07□□□□□ -0.64
APOBP04114 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.07□□□□□ -0.64
APOBP04114 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.07□□□□□ -0.64
APOBP04114 CENPM-205ENST00000404067 905 ntTSL 3 BASIC11.07□□□□□ -0.64
APOBP04114 FAM185BP-201ENST00000443595 716 ntBASIC11.07□□□□□ -0.64
APOBP04114 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.07□□□□□ -0.64
APOBP04114 RPS15P9-201ENST00000494093 319 ntBASIC11.07□□□□□ -0.64
APOBP04114 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC11.07□□□□□ -0.64
APOBP04114 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.07□□□□□ -0.64
APOBP04114 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOBP04114 AL353593.2-201ENST00000602529 1483 ntBASIC11.07□□□□□ -0.64
APOBP04114 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOBP04114 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOBP04114 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOBP04114 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOBP04114 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.07□□□□□ -0.64
APOBP04114 KLF4P1-201ENST00000412782 1185 ntBASIC11.07□□□□□ -0.64
APOBP04114 ARSEP1-201ENST00000420443 635 ntBASIC11.07□□□□□ -0.64
APOBP04114 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC11.07□□□□□ -0.64
APOBP04114 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC11.07□□□□□ -0.64
APOBP04114 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
APOBP04114 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOBP04114 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOBP04114 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOBP04114 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC11.07□□□□□ -0.64
APOBP04114 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOBP04114 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.07□□□□□ -0.64
APOBP04114 AL606495.2-201ENST00000605867 535 ntBASIC11.07□□□□□ -0.64
APOBP04114 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC11.07□□□□□ -0.64
APOBP04114 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
APOBP04114 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC11.07□□□□□ -0.64
APOBP04114 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC11.07□□□□□ -0.64
APOBP04114 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOBP04114 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOBP04114 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOBP04114 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.06□□□□□ -0.64
APOBP04114 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOBP04114 AP002414.1-201ENST00000391405 1147 ntBASIC11.06□□□□□ -0.64
APOBP04114 SPDYE14P-201ENST00000442619 822 ntBASIC11.06□□□□□ -0.64
APOBP04114 AC023141.13-201ENST00000604991 943 ntBASIC11.06□□□□□ -0.64
APOBP04114 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC11.06□□□□□ -0.64
APOBP04114 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC11.06□□□□□ -0.64
APOBP04114 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
APOBP04114 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
APOBP04114 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOBP04114 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOBP04114 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.06□□□□□ -0.64
APOBP04114 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOBP04114 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOBP04114 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOBP04114 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC11.06□□□□□ -0.64
APOBP04114 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC11.06□□□□□ -0.64
APOBP04114 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.06□□□□□ -0.64
APOBP04114 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
APOBP04114 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOBP04114 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC11.06□□□□□ -0.64
APOBP04114 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOBP04114 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOBP04114 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
APOBP04114 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOBP04114 TUBB3P1-201ENST00000405796 1332 ntBASIC11.06□□□□□ -0.64
APOBP04114 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
APOBP04114 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC11.06□□□□□ -0.64
APOBP04114 MIR6752-201ENST00000618442 71 ntBASIC11.06□□□□□ -0.64
APOBP04114 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms